Cow genome map
| Conread name: | Ova1-OVRM10029H02 |
| Conread position: | 19-599 |
| Cow position: | chr9:26083082-26082518 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 36-786 |
| Cow position: | chr9:28679459-28680194 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 65 |
| Conread position: | 41-784 |
| Cow position: | chr9:51180681-51179955 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 285 |
| Conread position: | 41-786 |
| Cow position: | chr9:1994908-1994188 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 246 |
| Conread position: | 41-786 |
| Cow position: | chr9:27783684-27784406 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 227 |
| Conread position: | 41-786 |
| Cow position: | chr9:47004230-47004960 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 253 |
| Conread position: | 44-321 |
| Cow position: | chr9:49456654-49456936 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 44-420 |
| Cow position: | chr9:9562547-9562183 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 142, 85 |
| Conread position: | 44-465 |
| Cow position: | chr9:52721937-52722355 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 224 |
| Conread position: | 44-599 |
| Cow position: | chr9:4942306-4941765 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 249 |
| Conread position: | 44-757 |
| Cow position: | chr9:9647644-9648354 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 76 |
| Conread position: | 44-784 |
| Cow position: | chr9:56302950-56302223 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 232 |
| Conread position: | 44-786 |
| Cow position: | chr9:3310116-3310841 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 189 |
| Conread position: | 44-786 |
| Cow position: | chr9:17062882-17062167 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 44-786 |
| Cow position: | chr9:45875019-45875738 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 87 |
| Conread position: | 45-217 |
| Cow position: | chr9:27935882-27936057 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 47-786 |
| Cow position: | chr9:21410810-21411531 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 246 |
| Conread position: | 50-202 |
| Cow position: | chr9:10976623-10976777 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 50-321 |
| Cow position: | chr9:32294847-32294577 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 81, 41 |
| Conread position: | 50-464 |
| Cow position: | chr9:6709466-6709866 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 221 |
| Conread position: | 50-466 |
| Cow position: | chr9:49514975-49514554 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 92, 81 |
| Conread position: | 50-599 |
| Cow position: | chr9:1074668-1074141 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 277 |
| Conread position: | 50-599 |
| Cow position: | chr9:64015164-64014635 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 244 |
| Conread position: | 50-626 |
| Cow position: | chr9:60325672-60325107 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 264 |
| Conread position: | 50-757 |
| Cow position: | chr9:30828249-30828946 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 134 |
| Conread position: | 50-773 |
| Cow position: | chr9:1250490-1249789 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 261 |
| Conread position: | 50-786 |
| Cow position: | chr9:779313-778597 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 50-786 |
| Cow position: | chr9:47043468-47044189 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 260 |
| Conread position: | 55-466 |
| Cow position: | chr9:22434116-22434512 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 75, 178 |
| Conread position: | 62-221 |
| Cow position: | chr9:51191429-51191590 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 62-239 |
| Cow position: | chr9:50093717-50093538 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 62-452 |
| Cow position: | chr9:8781408-8781030 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 265 |
| Conread position: | 62-784 |
| Cow position: | chr9:203774-203071 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 265 |
| Conread position: | 67-283 |
| Cow position: | chr9:25034036-25033824 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.