Cow genome map
| Conread name: | Ova1-OVRM10029H02 |
| Conread position: | 39-314 |
| Cow position: | chrX:42477411-42477140 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 82, 102 |
| Conread position: | 39-319 |
| Cow position: | chrX:27496114-27496401 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 41-321 |
| Cow position: | chrX:972180-972469 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 41-594 |
| Cow position: | chrX:13411722-13411193 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 477, 250 |
| Conread position: | 41-784 |
| Cow position: | chrX:27979412-27978689 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 128 |
| Conread position: | 41-786 |
| Cow position: | chrX:1548386-1549110 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 171 |
| Conread position: | 41-786 |
| Cow position: | chrX:30182522-30181798 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 249 |
| Conread position: | 42-786 |
| Cow position: | chrX:18220830-18221546 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 44-246 |
| Cow position: | chrX:5367741-5367542 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 44-266 |
| Cow position: | chrX:27084381-27084606 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 44-277 |
| Cow position: | chrX:12021436-12021658 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 44-321 |
| Cow position: | chrX:12668336-12668056 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 239, 0 |
| Conread position: | 44-619 |
| Cow position: | chrX:22127736-22127165 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 294 |
| Conread position: | 44-743 |
| Cow position: | chrX:16277058-16277738 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 267 |
| Conread position: | 44-777 |
| Cow position: | chrX:1784971-1785672 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 272 |
| Conread position: | 44-781 |
| Cow position: | chrX:29949202-29948489 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 179 |
| Conread position: | 44-786 |
| Cow position: | chrX:673798-673073 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 282 |
| Conread position: | 44-786 |
| Cow position: | chrX:21491568-21492295 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 268 |
| Conread position: | 44-786 |
| Cow position: | chrX:36072333-36071629 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 235 |
| Conread position: | 45-223 |
| Cow position: | chrX:12702293-12702112 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 45-464 |
| Cow position: | chrX:14460918-14461320 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 144 |
| Conread position: | 45-786 |
| Cow position: | chrX:2577833-2578553 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 59 |
| Conread position: | 45-786 |
| Cow position: | chrX:20034991-20034275 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 248 |
| Conread position: | 45-786 |
| Cow position: | chrX:28521196-28520469 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 267 |
| Conread position: | 45-786 |
| Cow position: | chrX:28586390-28587109 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 267 |
| Conread position: | 47-278 |
| Cow position: | chrX:31726532-31726758 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 47-773 |
| Cow position: | chrX:35026384-35027107 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 338 |
| Conread position: | 47-784 |
| Cow position: | chrX:5322316-5321587 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 280 |
| Conread position: | 48-466 |
| Cow position: | chrX:16406010-16406419 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 72, 140 |
| Conread position: | 50-205 |
| Cow position: | chrX:22566840-22566684 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 50-208 |
| Cow position: | chrX:18452396-18452556 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 50-290 |
| Cow position: | chrX:13095849-13095607 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 50-311 |
| Cow position: | chrX:23212625-23212367 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 50-319 |
| Cow position: | chrX:504796-504527 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 183 |
| Conread position: | 50-321 |
| Cow position: | chrX:13447411-13447135 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 50-321 |
| Cow position: | chrX:27618717-27618445 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 78 |
| Conread position: | 50-323 |
| Cow position: | chrX:11423286-11423564 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 50-464 |
| Cow position: | chrX:5393432-5393030 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 277 |
| Conread position: | 50-464 |
| Cow position: | chrX:7094883-7095284 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 277 |
| Conread position: | 50-464 |
| Cow position: | chrX:29936014-29936415 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 66 |
| Conread position: | 50-576 |
| Cow position: | chrX:30436259-30436766 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 277 |
| Conread position: | 50-594 |
| Cow position: | chrX:28757229-28756699 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 261 |
| Conread position: | 50-645 |
| Cow position: | chrX:2561444-2560863 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 283 |
| Conread position: | 50-675 |
| Cow position: | chrX:2857962-2857356 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 261 |
| Conread position: | 50-679 |
| Cow position: | chrX:11463632-11463010 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 237 |
| Conread position: | 50-753 |
| Cow position: | chrX:3083723-3083037 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 279 |
| Conread position: | 50-761 |
| Cow position: | chrX:30012414-30013111 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 287 |
| Conread position: | 50-764 |
| Cow position: | chrX:1941951-1941244 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 50-781 |
| Cow position: | chrX:21792029-21792755 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 277 |
| Conread position: | 50-784 |
| Cow position: | chrX:26398711-26397993 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 277 |
| Conread position: | 50-786 |
| Cow position: | chrX:2815068-2814350 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 261 |
| Conread position: | 50-786 |
| Cow position: | chrX:7753319-7754033 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 104 |
| Conread position: | 50-786 |
| Cow position: | chrX:14596262-14596986 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 139 |
| Conread position: | 50-786 |
| Cow position: | chrX:18658393-18657674 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 273 |
| Conread position: | 50-786 |
| Cow position: | chrX:24771447-24770723 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 261 |
| Conread position: | 50-786 |
| Cow position: | chrX:27424907-27424156 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 50-786 |
| Cow position: | chrX:30168663-30167945 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 95 |
| Conread position: | 50-786 |
| Cow position: | chrX:32065753-32065035 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 154 |
| Conread position: | 50-786 |
| Cow position: | chrX:35531270-35531989 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 276 |
| Conread position: | 50-786 |
| Cow position: | chrX:37850546-37851273 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 270 |
| Conread position: | 51-229 |
| Cow position: | chrX:12667532-12667712 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 55-319 |
| Cow position: | chrX:3142139-3142400 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 76, 135 |
| Conread position: | 55-594 |
| Cow position: | chrX:8589599-8590123 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 257 |
| Conread position: | 55-728 |
| Cow position: | chrX:21316870-21317557 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 133 |
| Conread position: | 55-786 |
| Cow position: | chrX:12344361-12345068 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 274 |
| Conread position: | 55-786 |
| Cow position: | chrX:24324145-24323423 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 272 |
| Conread position: | 55-786 |
| Cow position: | chrX:29095906-29095188 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 272 |
| Conread position: | 57-310 |
| Cow position: | chrX:31053294-31053040 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 142 |
| Conread position: | 62-319 |
| Cow position: | chrX:37957628-37957366 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 62-432 |
| Cow position: | chrX:21507741-21507383 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 265 |
| Conread position: | 62-773 |
| Cow position: | chrX:16684409-16683715 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 265 |
| Conread position: | 67-461 |
| Cow position: | chrX:23958434-23958801 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 67-756 |
| Cow position: | chrX:30833951-30834632 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 67-784 |
| Cow position: | chrX:17052983-17053689 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 259 |
| Conread position: | 332-767 |
| Cow position: | chrX:32545412-32545820 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 19 |
Show alignments to all cow chromosomes.