Cow genome map
| Conread name: | Ova1-OVRM10036C05 |
| Conread position: | 1-188 |
| Cow position: | chr10:53357803-53357606 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 118 |
| Conread position: | 1-190 |
| Cow position: | chr10:23912590-23912789 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 2-190 |
| Cow position: | chr10:15293179-15292979 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 2-216 |
| Cow position: | chr10:19372434-19372646 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 2-225 |
| Cow position: | chr10:2304477-2304696 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 3-165 |
| Cow position: | chr10:35715806-35715978 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 3-226 |
| Cow position: | chr10:19895299-19895071 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 3-226 |
| Cow position: | chr10:22390493-22390268 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 4-168 |
| Cow position: | chr10:23376561-23376734 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 4-180 |
| Cow position: | chr10:2185229-2185049 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-190 |
| Cow position: | chr10:35857153-35857347 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-202 |
| Cow position: | chr10:51696644-51696450 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-226 |
| Cow position: | chr10:24022376-24022605 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 6 |
| Conread position: | 4-226 |
| Cow position: | chr10:32775010-32774786 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 4-226 |
| Cow position: | chr10:51944260-51944034 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-226 |
| Cow position: | chr10:55733698-55733928 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-238 |
| Cow position: | chr10:1488741-1488508 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-260 |
| Cow position: | chr10:6719798-6719535 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 5-184 |
| Cow position: | chr10:9798301-9798480 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 6-191 |
| Cow position: | chr10:49038452-49038264 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 10-248 |
| Cow position: | chr10:42230557-42230303 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 8, 105 |
| Conread position: | 11-180 |
| Cow position: | chr10:24753045-24752875 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 11-191 |
| Cow position: | chr10:34554192-34554382 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 109 |
| Conread position: | 11-191 |
| Cow position: | chr10:38014261-38014079 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 15, 101 |
| Conread position: | 11-191 |
| Cow position: | chr10:58259620-58259809 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 11-198 |
| Cow position: | chr10:888821-888626 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 11-200 |
| Cow position: | chr10:15871976-15872167 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 11-207 |
| Cow position: | chr10:41802999-41803205 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 11-214 |
| Cow position: | chr10:24308019-24308211 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 11-216 |
| Cow position: | chr10:31400999-31401217 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 11-221 |
| Cow position: | chr10:28776246-28776049 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 11-226 |
| Cow position: | chr10:77285-77061 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 11-226 |
| Cow position: | chr10:8093419-8093646 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 11-226 |
| Cow position: | chr10:12392712-12392925 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 11-226 |
| Cow position: | chr10:18042083-18041851 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 11-226 |
| Cow position: | chr10:48462442-48462669 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 11-231 |
| Cow position: | chr10:54848672-54848442 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 110 |
| Conread position: | 12-226 |
| Cow position: | chr10:9526183-9526406 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 50 |
| Conread position: | 25-216 |
| Cow position: | chr10:16093096-16092897 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 25-226 |
| Cow position: | chr10:24763358-24763146 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 25-226 |
| Cow position: | chr10:54476987-54476777 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 25-247 |
| Cow position: | chr10:24871046-24870816 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 57-186 |
| Cow position: | chr10:31266489-31266612 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 57-225 |
| Cow position: | chr10:30567853-30568022 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 57-226 |
| Cow position: | chr10:48098453-48098283 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 136, 19 |
| Conread position: | 65-191 |
| Cow position: | chr10:13765331-13765457 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 65-226 |
| Cow position: | chr10:60237284-60237452 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 44 |
| Conread position: | 68-216 |
| Cow position: | chr10:5151179-5151023 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 69-218 |
| Cow position: | chr10:25259856-25259708 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 78, 43 |
Show alignments to all cow chromosomes.