Cow genome map
| Conread name: | Ova1-OVRM10036C05 |
| Conread position: | 1-226 |
| Cow position: | chr11:19788048-19787825 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 2-176 |
| Cow position: | chr11:5790003-5790189 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 116 |
| Conread position: | 2-190 |
| Cow position: | chr11:68206929-68207123 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 4-156 |
| Cow position: | chr11:48544345-48544190 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 110 |
| Conread position: | 4-181 |
| Cow position: | chr11:34829874-34830058 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 4-190 |
| Cow position: | chr11:25165350-25165158 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-191 |
| Cow position: | chr11:23128635-23128824 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 4-225 |
| Cow position: | chr11:46746535-46746310 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 4-226 |
| Cow position: | chr11:59155971-59156198 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-226 |
| Cow position: | chr11:65409247-65409485 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 4-248 |
| Cow position: | chr11:77750864-77751109 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 11-185 |
| Cow position: | chr11:41983551-41983729 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 103 |
| Conread position: | 11-187 |
| Cow position: | chr11:40258506-40258682 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 100 |
| Conread position: | 11-187 |
| Cow position: | chr11:43430551-43430731 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 15, 86 |
| Conread position: | 11-200 |
| Cow position: | chr11:77207948-77207752 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 107 |
| Conread position: | 11-226 |
| Cow position: | chr11:10294493-10294273 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 11-226 |
| Cow position: | chr11:38236145-38235914 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 11-226 |
| Cow position: | chr11:55348168-55347942 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 113 |
| Conread position: | 11-242 |
| Cow position: | chr11:30120764-30121002 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 12-181 |
| Cow position: | chr11:2281388-2281565 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 109 |
| Conread position: | 12-252 |
| Cow position: | chr11:40818737-40818992 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 13-225 |
| Cow position: | chr11:62749848-62750072 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 13, 110 |
| Conread position: | 13-226 |
| Cow position: | chr11:17968677-17968899 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 105 |
| Conread position: | 13-226 |
| Cow position: | chr11:73512531-73512743 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 46-226 |
| Cow position: | chr11:59702338-59702161 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 57-202 |
| Cow position: | chr11:65857702-65857558 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 64-224 |
| Cow position: | chr11:13076037-13076190 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 69-183 |
| Cow position: | chr11:17083464-17083578 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 93-226 |
| Cow position: | chr11:15373446-15373314 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.