Cow genome map
| Conread name: | Ova1-OVRM10036C05 |
| Conread position: | 2-260 |
| Cow position: | chr16:48086940-48087211 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 3-191 |
| Cow position: | chr16:47518764-47518579 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 4-160 |
| Cow position: | chr16:23810838-23810683 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-170 |
| Cow position: | chr16:47620306-47620131 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-172 |
| Cow position: | chr16:42633825-42633999 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 4-216 |
| Cow position: | chr16:49125603-49125815 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-218 |
| Cow position: | chr16:48370025-48370243 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 4-228 |
| Cow position: | chr16:16177741-16177509 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 5-216 |
| Cow position: | chr16:39616663-39616449 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 11-190 |
| Cow position: | chr16:589997-590178 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 15, 101 |
| Conread position: | 11-191 |
| Cow position: | chr16:48145483-48145669 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 11-191 |
| Cow position: | chr16:53086411-53086594 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 53, 103 |
| Conread position: | 11-214 |
| Cow position: | chr16:48398333-48398536 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 54, 102 |
| Conread position: | 11-225 |
| Cow position: | chr16:9790711-9790930 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 12-187 |
| Cow position: | chr16:37669818-37669994 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 13-226 |
| Cow position: | chr16:4857178-4857399 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 101 |
| Conread position: | 15-216 |
| Cow position: | chr16:47510058-47510269 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 11, 99 |
| Conread position: | 22-160 |
| Cow position: | chr16:56082455-56082599 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 94 |
| Conread position: | 22-226 |
| Cow position: | chr16:18141430-18141631 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 40, 89 |
| Conread position: | 25-188 |
| Cow position: | chr16:5741148-5740988 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 63 |
| Conread position: | 25-212 |
| Cow position: | chr16:5293568-5293372 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 25-226 |
| Cow position: | chr16:15189089-15188894 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 56-226 |
| Cow position: | chr16:31159714-31159876 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 64-226 |
| Cow position: | chr16:41890-41727 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 68-206 |
| Cow position: | chr16:15370531-15370395 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 69-224 |
| Cow position: | chr16:41064913-41065066 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 69-228 |
| Cow position: | chr16:15571249-15571085 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 69-229 |
| Cow position: | chr16:18354101-18354256 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.