Cow genome map
| Conread name: | Ova1-OVRM10036C05 |
| Conread position: | 1-225 |
| Cow position: | chr17:22032721-22032946 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 2-216 |
| Cow position: | chr17:27795614-27795394 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 4-190 |
| Cow position: | chr17:9746481-9746293 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-205 |
| Cow position: | chr17:20780477-20780267 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-216 |
| Cow position: | chr17:1295603-1295825 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-226 |
| Cow position: | chr17:18109119-18109350 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-226 |
| Cow position: | chr17:18860756-18860982 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-235 |
| Cow position: | chr17:21335728-21335971 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 5-148 |
| Cow position: | chr17:1063153-1063003 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 9, 112 |
| Conread position: | 7-216 |
| Cow position: | chr17:12059130-12059350 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 11-167 |
| Cow position: | chr17:21628440-21628277 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 106 |
| Conread position: | 11-178 |
| Cow position: | chr17:25097423-25097247 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 11-179 |
| Cow position: | chr17:13143730-13143907 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 11-185 |
| Cow position: | chr17:41290060-41290240 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 11-214 |
| Cow position: | chr17:5730875-5730672 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 61 |
| Conread position: | 11-215 |
| Cow position: | chr17:13244080-13244279 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 11-215 |
| Cow position: | chr17:17059392-17059187 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 11-225 |
| Cow position: | chr17:26183183-26182959 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 11-226 |
| Cow position: | chr17:44924226-44924439 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 11-247 |
| Cow position: | chr17:43717354-43717591 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 12-207 |
| Cow position: | chr17:18495561-18495752 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 13-174 |
| Cow position: | chr17:1275483-1275307 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 13-216 |
| Cow position: | chr17:32989440-32989239 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 78 |
| Conread position: | 13-225 |
| Cow position: | chr17:2034494-2034287 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 74 |
| Conread position: | 15-247 |
| Cow position: | chr17:29715230-29715469 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 17, 104 |
| Conread position: | 27-202 |
| Cow position: | chr17:20072137-20072314 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 86 |
| Conread position: | 43-189 |
| Cow position: | chr17:27770035-27770184 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 56-226 |
| Cow position: | chr17:34390654-34390825 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 56-260 |
| Cow position: | chr17:2275182-2274974 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 57-215 |
| Cow position: | chr17:24550078-24549917 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 97 |
| Conread position: | 57-216 |
| Cow position: | chr17:20022613-20022771 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 69-216 |
| Cow position: | chr17:3306759-3306615 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.