Cow genome map


           Conread name:
           Ova1-OVRM10036C05
        

               Conread position:
               2-160
               

               Cow position:
               chr20:20739316-20739485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               4-188
               

               Cow position:
               chr20:14572391-14572582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               4-189
               

               Cow position:
               chr20:21325084-21324901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               149, 10
               

               Conread position:
               4-191
               

               Cow position:
               chr20:13465480-13465291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               97, 24
               

               Conread position:
               11-173
               

               Cow position:
               chr20:34918234-34918070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               11-225
               

               Cow position:
               chr20:22313196-22313421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               15, 108
               

               Conread position:
               11-225
               

               Cow position:
               chr20:33144590-33144814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               11-226
               

               Cow position:
               chr20:6096531-6096747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               15-191
               

               Cow position:
               chr20:23505787-23505602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               18-175
               

               Cow position:
               chr20:22851108-22850951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               70, 81
               

               Conread position:
               25-226
               

               Cow position:
               chr20:19459714-19459905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               68-180
               

               Cow position:
               chr20:41451911-41452022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               41, 0
               
Show alignments to all cow chromosomes.