Cow genome map


           Conread name:
           Ova1-OVRM10036C05
        

               Conread position:
               4-214
               

               Cow position:
               chr27:19388045-19388266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               5-226
               

               Cow position:
               chr27:13875767-13875989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               6-238
               

               Cow position:
               chr27:25783641-25783872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               7-170
               

               Cow position:
               chr27:19685678-19685509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               19, 109
               

               Conread position:
               11-155
               

               Cow position:
               chr27:20037089-20036938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               11-168
               

               Cow position:
               chr27:20354621-20354783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               11-222
               

               Cow position:
               chr27:4805872-4805651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               11-226
               

               Cow position:
               chr27:26424549-26424328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 133
               

               Conread position:
               11-248
               

               Cow position:
               chr27:11435285-11435045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 101
               

               Conread position:
               12-216
               

               Cow position:
               chr27:23930014-23930215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               13-226
               

               Cow position:
               chr27:8291967-8291749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 105
               

               Conread position:
               13-227
               

               Cow position:
               chr27:6674276-6674498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               51, 110
               

               Conread position:
               25-178
               

               Cow position:
               chr27:17926580-17926424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 89
               

               Conread position:
               25-201
               

               Cow position:
               chr27:25380045-25380227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               25-216
               

               Cow position:
               chr27:16620040-16620239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               34, 97
               

               Conread position:
               25-226
               

               Cow position:
               chr27:1768570-1768377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               28-225
               

               Cow position:
               chr27:9371559-9371760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 84
               

               Conread position:
               58-226
               

               Cow position:
               chr27:31372885-31372719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               62-186
               

               Cow position:
               chr27:23083654-23083776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               42, 14
               
Show alignments to all cow chromosomes.