Cow genome map
| Conread name: | Ova1-OVRM10036C05 |
| Conread position: | 1-174 |
| Cow position: | chr3:5899726-5899550 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 1-190 |
| Cow position: | chr3:75057223-75057405 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 2-171 |
| Cow position: | chr3:525254-525081 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 2-216 |
| Cow position: | chr3:1830663-1830883 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 2-217 |
| Cow position: | chr3:68514657-68514868 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-168 |
| Cow position: | chr3:70899796-70899630 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 4-185 |
| Cow position: | chr3:23408450-23408629 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 4-187 |
| Cow position: | chr3:29596293-29596106 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 4-190 |
| Cow position: | chr3:15057707-15057890 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-226 |
| Cow position: | chr3:28908302-28908531 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 4-226 |
| Cow position: | chr3:49218412-49218635 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 6-178 |
| Cow position: | chr3:57764127-57763943 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 8-191 |
| Cow position: | chr3:22716381-22716574 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 111 |
| Conread position: | 10-224 |
| Cow position: | chr3:59691795-59691578 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 103 |
| Conread position: | 11-153 |
| Cow position: | chr3:48578730-48578586 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 11-168 |
| Cow position: | chr3:57624360-57624193 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 105 |
| Conread position: | 11-173 |
| Cow position: | chr3:32585049-32584883 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 66 |
| Conread position: | 11-175 |
| Cow position: | chr3:49731745-49731914 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 11-189 |
| Cow position: | chr3:58383864-58383677 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 11-190 |
| Cow position: | chr3:3985223-3985038 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 11-190 |
| Cow position: | chr3:45648028-45647845 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 11-190 |
| Cow position: | chr3:65413384-65413567 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 11-224 |
| Cow position: | chr3:66609947-66610164 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 11-226 |
| Cow position: | chr3:210213-209994 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 11-226 |
| Cow position: | chr3:55189861-55190075 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 54, 151 |
| Conread position: | 11-247 |
| Cow position: | chr3:18067031-18066787 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 15, 227 |
| Conread position: | 11-247 |
| Cow position: | chr3:72675988-72675736 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 12-178 |
| Cow position: | chr3:34392202-34392376 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 12-226 |
| Cow position: | chr3:16752359-16752575 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 107 |
| Conread position: | 12-226 |
| Cow position: | chr3:59597078-59596877 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 12-247 |
| Cow position: | chr3:10958348-10958572 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 14, 52 |
| Conread position: | 13-186 |
| Cow position: | chr3:56704650-56704825 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 76 |
| Conread position: | 13-216 |
| Cow position: | chr3:22676197-22676397 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 25-188 |
| Cow position: | chr3:29813125-29812954 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 94 |
| Conread position: | 25-224 |
| Cow position: | chr3:70565857-70566064 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 25-226 |
| Cow position: | chr3:6853624-6853831 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 28-206 |
| Cow position: | chr3:35975229-35975413 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 89 |
| Conread position: | 40-226 |
| Cow position: | chr3:49461081-49461265 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 74-226 |
| Cow position: | chr3:17331590-17331440 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 6, 0 |
Show alignments to all cow chromosomes.