Cow genome map
| Conread name: | Ova1-OVRM10036C05 |
| Conread position: | 1-216 |
| Cow position: | chr4:13693753-13693974 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 4-190 |
| Cow position: | chr4:52748540-52748734 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-210 |
| Cow position: | chr4:29237240-29237450 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 58, 113 |
| Conread position: | 4-216 |
| Cow position: | chr4:68233892-68233679 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 4-218 |
| Cow position: | chr4:22744243-22744025 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-225 |
| Cow position: | chr4:22010147-22010369 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-226 |
| Cow position: | chr4:1915660-1915887 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 10-226 |
| Cow position: | chr4:480092-480319 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 11-148 |
| Cow position: | chr4:41907880-41908026 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 11-170 |
| Cow position: | chr4:42921939-42922102 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 11-190 |
| Cow position: | chr4:41867356-41867168 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 108 |
| Conread position: | 11-198 |
| Cow position: | chr4:38999335-38999143 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 63, 105 |
| Conread position: | 11-216 |
| Cow position: | chr4:19561596-19561393 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 13, 74 |
| Conread position: | 11-216 |
| Cow position: | chr4:31136663-31136451 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 11-225 |
| Cow position: | chr4:60897364-60897584 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 11-225 |
| Cow position: | chr4:65825940-65826177 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 111 |
| Conread position: | 11-226 |
| Cow position: | chr4:3990711-3990934 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 149 |
| Conread position: | 11-226 |
| Cow position: | chr4:7501782-7501574 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 11-226 |
| Cow position: | chr4:21391901-21392109 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 11-226 |
| Cow position: | chr4:46275104-46274881 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 11-248 |
| Cow position: | chr4:30974252-30974004 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 13-215 |
| Cow position: | chr4:25879308-25879096 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 109 |
| Conread position: | 13-216 |
| Cow position: | chr4:23854106-23853901 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 13-226 |
| Cow position: | chr4:65179218-65179447 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 106 |
| Conread position: | 15-226 |
| Cow position: | chr4:19097197-19096983 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 25-186 |
| Cow position: | chr4:49629380-49629225 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 25-224 |
| Cow position: | chr4:6653626-6653430 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 37, 90 |
| Conread position: | 28-226 |
| Cow position: | chr4:23646948-23647155 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 29-226 |
| Cow position: | chr4:54501556-54501761 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 31-198 |
| Cow position: | chr4:1014950-1014783 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 79 |
| Conread position: | 57-187 |
| Cow position: | chr4:7571266-7571136 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 41, 53 |
| Conread position: | 58-216 |
| Cow position: | chr4:16813918-16814072 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 58-225 |
| Cow position: | chr4:39231668-39231834 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 69-196 |
| Cow position: | chr4:16799349-16799474 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.