Cow genome map
| Conread name: | Ova1-OVRM10036C05 |
| Conread position: | 1-226 |
| Cow position: | chr5:4218826-4218602 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 2-226 |
| Cow position: | chr5:59443291-59443530 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 10, 159 |
| Conread position: | 4-180 |
| Cow position: | chr5:41165037-41164855 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 4-191 |
| Cow position: | chr5:24642775-24642966 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 4-203 |
| Cow position: | chr5:43474798-43474591 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 4-216 |
| Cow position: | chr5:32378806-32378603 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 4-224 |
| Cow position: | chr5:26377718-26377941 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-225 |
| Cow position: | chr5:63917459-63917685 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 8-226 |
| Cow position: | chr5:44848079-44848290 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 10-189 |
| Cow position: | chr5:32140762-32140947 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 16, 113 |
| Conread position: | 11-178 |
| Cow position: | chr5:40387929-40388097 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 11-183 |
| Cow position: | chr5:65776437-65776622 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 11-216 |
| Cow position: | chr5:9894184-9894396 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 11-224 |
| Cow position: | chr5:44583183-44583393 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 11-225 |
| Cow position: | chr5:37377811-37377590 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 11-226 |
| Cow position: | chr5:5111130-5111356 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 110 |
| Conread position: | 11-226 |
| Cow position: | chr5:65752802-65752580 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 12-187 |
| Cow position: | chr5:12563061-12563246 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 152 |
| Conread position: | 12-187 |
| Cow position: | chr5:37646604-37646792 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 12-204 |
| Cow position: | chr5:3280927-3281125 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 12-226 |
| Cow position: | chr5:47317027-47317247 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 14, 106 |
| Conread position: | 13-188 |
| Cow position: | chr5:62172359-62172176 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 104 |
| Conread position: | 13-216 |
| Cow position: | chr5:63987502-63987716 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 108 |
| Conread position: | 13-226 |
| Cow position: | chr5:34528504-34528285 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 49, 106 |
| Conread position: | 25-186 |
| Cow position: | chr5:11668255-11668417 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 27, 87 |
| Conread position: | 25-191 |
| Cow position: | chr5:53835643-53835473 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 92 |
| Conread position: | 64-225 |
| Cow position: | chr5:72035203-72035363 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 73-198 |
| Cow position: | chr5:27403370-27403495 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 37 |
Show alignments to all cow chromosomes.