Cow genome map
| Conread name: | Ova1-OVRM10036C05 |
| Conread position: | 1-190 |
| Cow position: | chr6:8804562-8804755 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 13, 26 |
| Conread position: | 1-248 |
| Cow position: | chr6:18961548-18961810 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 2-225 |
| Cow position: | chr6:66531854-66532066 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 197, 63 |
| Conread position: | 2-226 |
| Cow position: | chr6:32121878-32121646 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 3-292 |
| Cow position: | chr6:19508474-19508765 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 4-180 |
| Cow position: | chr6:38771251-38771077 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-183 |
| Cow position: | chr6:38207526-38207717 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-190 |
| Cow position: | chr6:4383451-4383264 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-221 |
| Cow position: | chr6:34196185-34196408 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 4-227 |
| Cow position: | chr6:46465788-46465562 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 8-185 |
| Cow position: | chr6:45160333-45160515 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 108 |
| Conread position: | 11-190 |
| Cow position: | chr6:44194583-44194774 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 11-200 |
| Cow position: | chr6:20098005-20098203 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 11-225 |
| Cow position: | chr6:9008652-9008871 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 11-226 |
| Cow position: | chr6:18988172-18987952 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 11-226 |
| Cow position: | chr6:26728565-26728791 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 11-226 |
| Cow position: | chr6:35471560-35471791 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 11-228 |
| Cow position: | chr6:29210456-29210235 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 106 |
| Conread position: | 11-228 |
| Cow position: | chr6:62479204-62479432 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 11-248 |
| Cow position: | chr6:40032152-40031904 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 11-248 |
| Cow position: | chr6:62925038-62925282 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 13, 104 |
| Conread position: | 12-198 |
| Cow position: | chr6:64431893-64431702 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 12-215 |
| Cow position: | chr6:7130926-7131125 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 14-160 |
| Cow position: | chr6:21231487-21231337 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 23-226 |
| Cow position: | chr6:3936487-3936282 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 42, 134 |
| Conread position: | 25-160 |
| Cow position: | chr6:37603467-37603324 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 25-181 |
| Cow position: | chr6:21184902-21184736 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 94 |
| Conread position: | 25-185 |
| Cow position: | chr6:51398746-51398577 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 25-226 |
| Cow position: | chr6:9732899-9733096 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 25-226 |
| Cow position: | chr6:60018010-60017805 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 90 |
| Conread position: | 25-248 |
| Cow position: | chr6:6343371-6343138 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 56-226 |
| Cow position: | chr6:25358974-25358812 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 57-229 |
| Cow position: | chr6:66303944-66304108 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 58-180 |
| Cow position: | chr6:7190215-7190338 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 62-216 |
| Cow position: | chr6:3592021-3591871 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 73-190 |
| Cow position: | chr6:50640719-50640601 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 84, 36 |
Show alignments to all cow chromosomes.