Cow genome map
| Conread name: | Ova1-OVRM10036C05 |
| Conread position: | 1-167 |
| Cow position: | chr7:38696818-38696644 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 1-175 |
| Cow position: | chr7:46823640-46823456 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 43, 118 |
| Conread position: | 1-208 |
| Cow position: | chr7:38082126-38081911 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 1-216 |
| Cow position: | chr7:12995131-12994912 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 1-221 |
| Cow position: | chr7:34004342-34004110 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 21, 122 |
| Conread position: | 2-191 |
| Cow position: | chr7:29345964-29346164 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 2-191 |
| Cow position: | chr7:48020390-48020208 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 2-226 |
| Cow position: | chr7:42222975-42223209 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 47, 118 |
| Conread position: | 2-226 |
| Cow position: | chr7:49648334-49648100 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 2-247 |
| Cow position: | chr7:59660710-59660466 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 2-277 |
| Cow position: | chr7:36248068-36247796 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 69, 12 |
| Conread position: | 4-156 |
| Cow position: | chr7:6041944-6041792 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-190 |
| Cow position: | chr7:39930259-39930070 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-191 |
| Cow position: | chr7:16022262-16022073 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 4-191 |
| Cow position: | chr7:42244726-42244924 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-198 |
| Cow position: | chr7:21327002-21326809 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 4-202 |
| Cow position: | chr7:41293780-41293988 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 4-215 |
| Cow position: | chr7:44589883-44590094 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 55, 179 |
| Conread position: | 4-216 |
| Cow position: | chr7:21650070-21649850 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 4-216 |
| Cow position: | chr7:53989021-53988808 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 10, 65 |
| Conread position: | 4-226 |
| Cow position: | chr7:23619118-23619348 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 14, 10 |
| Conread position: | 4-226 |
| Cow position: | chr7:26631846-26632074 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-226 |
| Cow position: | chr7:28090200-28089978 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-226 |
| Cow position: | chr7:58967238-58967012 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 5-227 |
| Cow position: | chr7:39042561-39042339 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 151, 32 |
| Conread position: | 9-216 |
| Cow position: | chr7:60749144-60748927 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 17, 106 |
| Conread position: | 10-226 |
| Cow position: | chr7:63749512-63749744 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 16, 113 |
| Conread position: | 11-163 |
| Cow position: | chr7:30172126-30172272 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 11-168 |
| Cow position: | chr7:44986613-44986453 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 11-218 |
| Cow position: | chr7:14450302-14450100 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 52 |
| Conread position: | 11-225 |
| Cow position: | chr7:16220158-16220387 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 14, 114 |
| Conread position: | 11-226 |
| Cow position: | chr7:4138768-4138983 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 11-226 |
| Cow position: | chr7:14542097-14542314 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 11-226 |
| Cow position: | chr7:39904056-39903841 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 100 |
| Conread position: | 11-226 |
| Cow position: | chr7:52718673-52718904 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 11-226 |
| Cow position: | chr7:56820610-56820834 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 12-225 |
| Cow position: | chr7:17756999-17756783 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 13-189 |
| Cow position: | chr7:34422309-34422487 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 13-215 |
| Cow position: | chr7:26911481-26911686 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 13-215 |
| Cow position: | chr7:40567031-40566822 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 104 |
| Conread position: | 13-226 |
| Cow position: | chr7:40121423-40121188 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 25-159 |
| Cow position: | chr7:48667369-48667231 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 25-188 |
| Cow position: | chr7:64102459-64102633 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 37, 97 |
| Conread position: | 25-226 |
| Cow position: | chr7:40710059-40709846 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 30-184 |
| Cow position: | chr7:50905826-50905672 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 39-199 |
| Cow position: | chr7:39988335-39988173 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 56-225 |
| Cow position: | chr7:19466361-19466523 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 57-221 |
| Cow position: | chr7:36533937-36533775 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 97, 52 |
| Conread position: | 76-191 |
| Cow position: | chr7:33298538-33298648 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.