Cow genome map
| Conread name: | Ova1-OVRM10036C05 |
| Conread position: | 1-226 |
| Cow position: | chrX:8925656-8925428 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 2-191 |
| Cow position: | chrX:42499074-42499272 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 2-202 |
| Cow position: | chrX:28878215-28878416 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 3-216 |
| Cow position: | chrX:23061399-23061186 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 4-168 |
| Cow position: | chrX:29601878-29602053 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-173 |
| Cow position: | chrX:29509489-29509669 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-174 |
| Cow position: | chrX:7721941-7721758 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 4-191 |
| Cow position: | chrX:26875931-26876124 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 4-200 |
| Cow position: | chrX:678614-678820 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-200 |
| Cow position: | chrX:23497716-23497915 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 165 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-204 |
| Cow position: | chrX:7497192-7496989 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 4-224 |
| Cow position: | chrX:34401950-34401721 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-226 |
| Cow position: | chrX:14924953-14924722 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-226 |
| Cow position: | chrX:17498037-17497818 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-226 |
| Cow position: | chrX:42461792-42462026 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 4-281 |
| Cow position: | chrX:5638216-5638502 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 8-191 |
| Cow position: | chrX:7513462-7513273 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 11-159 |
| Cow position: | chrX:29542273-29542430 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 11-184 |
| Cow position: | chrX:15815033-15814861 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 81 |
| Conread position: | 11-186 |
| Cow position: | chrX:17794929-17794747 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 15, 106 |
| Conread position: | 11-188 |
| Cow position: | chrX:23514069-23514258 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 15, 135 |
| Conread position: | 11-189 |
| Cow position: | chrX:39558404-39558591 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 11-190 |
| Cow position: | chrX:30832901-30833080 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 11-226 |
| Cow position: | chrX:151851-151623 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 11-226 |
| Cow position: | chrX:6544202-6543978 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 11-226 |
| Cow position: | chrX:14599479-14599254 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 11-226 |
| Cow position: | chrX:20697658-20697881 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 11-226 |
| Cow position: | chrX:34532467-34532253 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 11-274 |
| Cow position: | chrX:35268828-35268562 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 12-151 |
| Cow position: | chrX:17908341-17908487 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 105 |
| Conread position: | 13-216 |
| Cow position: | chrX:11082670-11082881 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 13, 109 |
| Conread position: | 13-226 |
| Cow position: | chrX:4043910-4044136 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 20-226 |
| Cow position: | chrX:31442886-31443099 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 28, 6 |
| Conread position: | 25-226 |
| Cow position: | chrX:15007218-15007429 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 25-226 |
| Cow position: | chrX:32978322-32978535 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 25-247 |
| Cow position: | chrX:28866068-28866286 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 33-190 |
| Cow position: | chrX:9635258-9635423 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 85 |
| Conread position: | 36-226 |
| Cow position: | chrX:46771062-46771250 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 64-226 |
| Cow position: | chrX:11949608-11949771 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 44 |
Show alignments to all cow chromosomes.