Cow genome map
| Conread name: | Ova1-OVRM10051D08 |
| Conread position: | 1-241 |
| Cow position: | chr1:74535463-74535699 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 11, 66 |
| Conread position: | 1-330 |
| Cow position: | chr1:45072071-45071741 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 110 |
| Conread position: | 1-331 |
| Cow position: | chr1:99069115-99069441 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 48 |
| Conread position: | 5-334 |
| Cow position: | chr1:67999850-67999522 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 62 |
| Conread position: | 8-338 |
| Cow position: | chr1:73039789-73040121 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 9-309 |
| Cow position: | chr1:77980390-77980676 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 31-331 |
| Cow position: | chr1:88636402-88636686 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 161, 35 |
| Conread position: | 64-253 |
| Cow position: | chr1:63050691-63050490 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 85 |
| Conread position: | 67-314 |
| Cow position: | chr1:93834219-93834471 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 68, 41 |
| Conread position: | 71-326 |
| Cow position: | chr1:85691099-85690840 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 106, 70 |
| Conread position: | 77-241 |
| Cow position: | chr1:28879664-28879496 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 86, 63 |
| Conread position: | 77-333 |
| Cow position: | chr1:15192115-15192370 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 99, 52 |
| Conread position: | 79-291 |
| Cow position: | chr1:11606213-11606425 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 63 |
| Conread position: | 79-334 |
| Cow position: | chr1:64394925-64395168 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 219, 31 |
| Conread position: | 79-353 |
| Cow position: | chr1:42542545-42542825 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 49, 63 |
| Conread position: | 86-328 |
| Cow position: | chr1:68371879-68372119 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 44 |
| Conread position: | 87-313 |
| Cow position: | chr1:20075416-20075185 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 86, 21 |
| Conread position: | 88-310 |
| Cow position: | chr1:5238546-5238326 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 100-325 |
| Cow position: | chr1:64632192-64631969 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 73, 29 |
| Conread position: | 100-328 |
| Cow position: | chr1:62136244-62136477 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 100-328 |
| Cow position: | chr1:97645666-97645885 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 92 |
| Conread position: | 109-328 |
| Cow position: | chr1:81000643-81000859 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 110-325 |
| Cow position: | chr1:99217977-99217758 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 112-325 |
| Cow position: | chr1:23544489-23544701 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 57, 36 |
| Conread position: | 121-325 |
| Cow position: | chr1:42948456-42948657 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 178-336 |
| Cow position: | chr1:38055030-38054872 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 71 |
| Conread position: | 192-327 |
| Cow position: | chr1:6535048-6535180 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 8, 55 |
Show alignments to all cow chromosomes.