Cow genome map
| Conread name: | Ova1-OVRM10051D08 |
| Conread position: | 1-314 |
| Cow position: | chr5:67647288-67647597 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 176, 65 |
| Conread position: | 1-328 |
| Cow position: | chr5:29739453-29739783 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 72 |
| Conread position: | 1-330 |
| Cow position: | chr5:20957321-20956995 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 1-334 |
| Cow position: | chr5:54891978-54892298 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 5-331 |
| Cow position: | chr5:29513395-29513710 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 7-284 |
| Cow position: | chr5:32186950-32187225 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 78, 62 |
| Conread position: | 7-336 |
| Cow position: | chr5:5227735-5227408 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 170, 59 |
| Conread position: | 67-345 |
| Cow position: | chr5:30622096-30622382 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 62, 196 |
| Conread position: | 76-328 |
| Cow position: | chr5:8240192-8240454 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 89, 65 |
| Conread position: | 77-241 |
| Cow position: | chr5:7925744-7925905 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 71, 98 |
| Conread position: | 77-293 |
| Cow position: | chr5:65093008-65093231 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 77-314 |
| Cow position: | chr5:12177781-12177540 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 77-333 |
| Cow position: | chr5:71595318-71595061 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 81-310 |
| Cow position: | chr5:58370974-58371197 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 119, 59 |
| Conread position: | 81-351 |
| Cow position: | chr5:53629721-53629997 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 39, 175 |
| Conread position: | 98-310 |
| Cow position: | chr5:35612547-35612331 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 98-336 |
| Cow position: | chr5:51729177-51729415 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 100-310 |
| Cow position: | chr5:38398242-38398030 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 100-334 |
| Cow position: | chr5:25730292-25730056 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 103-329 |
| Cow position: | chr5:28813758-28813526 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 153 |
| Conread position: | 104-310 |
| Cow position: | chr5:21782951-21782742 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 132-340 |
| Cow position: | chr5:28410346-28410135 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 45, 9 |
Show alignments to all cow chromosomes.