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Cow genome map

           
Conread name:
           
Ova1-OVRM10061A04
        

               
Conread position:
               
1-192
               

               
Cow position:
               
chr28:7882497-7882697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr28:17316557-17316754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr28:19564900-19564699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr28:16879572-16879365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr28:8372164-8372396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr28:3479958-3480196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr28:20760230-20759984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
78, 5
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr28:13889637-13889900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr28:2949235-2949494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 112
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr28:33640512-33640780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
100, 5
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr28:4582931-4583200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr28:7746029-7746305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr28:24606118-24605853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr28:34008260-34007985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr28:4880571-4880304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 191
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr28:17030016-17029752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
267, 26
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr28:7590490-7590211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr28:11451782-11451494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
44, 272
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr28:23839905-23840171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
198, 33
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr28:29392695-29392982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr28:6960189-6960471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
84, 275
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr28:29658797-29658521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 112
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr28:4215063-4215353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr28:27684013-27683726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 270
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr28:9848634-9848342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
146, 91
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr28:4022075-4022368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr28:19295669-19295376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr28:26781776-26782072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
84, 271
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr28:3474665-3474947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 103
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr28:5805212-5805498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:12457849-12458153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
97, 103
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr28:5212284-5212590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr28:22322958-22323262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
83, 291
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr28:5270577-5270889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr28:19515699-19515391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
84, 264
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr28:3751012-3751333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 228
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr28:30532050-30531701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
84, 314
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr28:5904429-5904787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 142
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr28:3256494-3256858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 75
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr28:7751607-7751239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr28:7549369-7548989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 194
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr28:5747758-5747384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 144
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr28:7209177-7208800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 93
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr28:11505323-11504944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
84, 268
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr28:26419053-26418671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr28:26727719-26727347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
84, 115
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr28:10534234-10533860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 20
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr28:16770285-16770670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 132
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr28:16686727-16687106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 49
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr28:10682129-10681743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr28:10744898-10745296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 296
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr28:14150931-14151304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr28:21380574-21380967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 68
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr28:32300673-32300267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
53, 207
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr28:11931693-11931285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
97, 271
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr28:13693442-13693840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
83, 127
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr28:5361322-5360911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
84, 271
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr28:23530557-23530979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
83, 121
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr28:7268240-7267836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr28:8022418-8021988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 126
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr28:11527561-11527144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr28:18590963-18591385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr28:26614588-26614988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 80
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr28:21598560-21598133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 300
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr28:7865024-7865448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 33
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr28:6059774-6059351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr28:14997757-14998186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 103
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr28:23675841-23676258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 31
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr28:33163764-33163345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 14
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr28:3914403-3914837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 291
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr28:10589336-10588902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr28:25399583-25399988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr28:12892710-12892315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
347, 5
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr28:16346823-16346411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 49
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr28:21354917-21355354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 187
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr28:3144194-3143754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 33
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr28:16085018-16085450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr28:3745896-3746332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr28:11752452-11752008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 238
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr28:3024216-3023782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr28:10606919-10606502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
185, 62
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr28:21844649-21845089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 237
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr28:5203898-5204329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr28:16211404-16210966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 227
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr28:34561051-34561477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 149
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr28:5771059-5771500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
78, 169
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr28:21363451-21363878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
82, 109
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr28:22332243-22332666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr28:7698284-7697842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 22
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr28:28766217-28765763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
83, 316
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr28:5684397-5684852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 258
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr28:6971646-6971196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 150
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr28:4070657-4071124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 278
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr28:12619258-12619733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr28:4138985-4138486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr28:14657389-14657910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr28:17638171-17637663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr28:2961125-2960616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr28:20124482-20124981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr28:21868144-21868657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 285
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr28:24671966-24672468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
86, 136
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr28:20312967-20313499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 114
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr28:11733432-11732892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
113, 91
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr28:5366452-5365891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr28:25806290-25806806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 33
               

               
Conread position:
               
1-533
               

               
Cow position:
               
chr28:12964270-12964792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 120
               

               
Conread position:
               
1-533
               

               
Cow position:
               
chr28:13474000-13474510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr28:22308354-22308859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr28:19222452-19221921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 205
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr28:16364277-16363983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 250
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr28:25563772-25564123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
2-376
               

               
Cow position:
               
chr28:18139762-18139390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 199
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr28:5826642-5827024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
82, 143
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr28:13267475-13267875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
2-429
               

               
Cow position:
               
chr28:4308204-4307776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
2-441
               

               
Cow position:
               
chr28:16919467-16919037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
2-515
               

               
Cow position:
               
chr28:4282798-4282296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 174
               

               
Conread position:
               
2-522
               

               
Cow position:
               
chr28:21104150-21103620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
2-531
               

               
Cow position:
               
chr28:8787244-8787748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 79
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr28:21129428-21129188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr28:15375127-15374855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr28:3187594-3187290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 145
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr28:10762370-10762704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 66
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr28:29035701-29035321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 305
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr28:11585513-11585084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 299
               

               
Conread position:
               
3-448
               

               
Cow position:
               
chr28:28163791-28164224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
3-489
               

               
Cow position:
               
chr28:11687330-11686851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
3-521
               

               
Cow position:
               
chr28:12430304-12430804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
3-522
               

               
Cow position:
               
chr28:8347417-8347934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 162
               

               
Conread position:
               
4-429
               

               
Cow position:
               
chr28:24966084-24966507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 225
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr28:16401594-16401868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr28:3161379-3161138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr28:2279968-2279698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
74, 206
               

               
Conread position:
               
6-274
               

               
Cow position:
               
chr28:23480563-23480289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr28:17392518-17392824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
6-305
               

               
Cow position:
               
chr28:32305300-32304992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr28:2814801-2814432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr28:7512892-7512498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr28:30327386-30326975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
6-429
               

               
Cow position:
               
chr28:32174353-32174749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
151, 57
               

               
Conread position:
               
7-393
               

               
Cow position:
               
chr28:4536169-4536544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 141
               

               
Conread position:
               
7-443
               

               
Cow position:
               
chr28:25056670-25057096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 166
               

               
Conread position:
               
7-472
               

               
Cow position:
               
chr28:22371977-22371503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 74
               

               
Conread position:
               
8-445
               

               
Cow position:
               
chr28:33884109-33884537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 106
               

               
Conread position:
               
9-261
               

               
Cow position:
               
chr28:1508835-1509095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
9-299
               

               
Cow position:
               
chr28:786613-786911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
9-427
               

               
Cow position:
               
chr28:23008027-23007610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 143
               

               
Conread position:
               
9-432
               

               
Cow position:
               
chr28:31110301-31109878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 10
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr28:30977986-30978244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
211, 12
               

               
Conread position:
               
11-384
               

               
Cow position:
               
chr28:6546687-6546296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 96
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr28:15044152-15043750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
14-292
               

               
Cow position:
               
chr28:9390659-9390378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
75, 191
               

               
Conread position:
               
15-414
               

               
Cow position:
               
chr28:7228677-7228284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
16-441
               

               
Cow position:
               
chr28:5817555-5817975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
17-275
               

               
Cow position:
               
chr28:22171010-22170746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chr28:26784758-26784495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
21-278
               

               
Cow position:
               
chr28:15063626-15063368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
107, 217
               

               
Conread position:
               
21-341
               

               
Cow position:
               
chr28:7606947-7607268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
22-377
               

               
Cow position:
               
chr28:25070826-25071188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 123
               

               
Conread position:
               
22-399
               

               
Cow position:
               
chr28:18354606-18354242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
23-471
               

               
Cow position:
               
chr28:11426829-11426380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
28-252
               

               
Cow position:
               
chr28:3246058-3246278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
28-379
               

               
Cow position:
               
chr28:30303473-30303128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
117, 56
               

               
Conread position:
               
29-429
               

               
Cow position:
               
chr28:29199448-29199850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 144
               

               
Conread position:
               
31-435
               

               
Cow position:
               
chr28:661844-662235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
319, 50
               

               
Conread position:
               
31-437
               

               
Cow position:
               
chr28:23410601-23410195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
34-381
               

               
Cow position:
               
chr28:15263998-15263645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr28:21672525-21672881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
34-429
               

               
Cow position:
               
chr28:26743348-26743746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 113
               

               
Conread position:
               
37-295
               

               
Cow position:
               
chr28:4957522-4957255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
37-305
               

               
Cow position:
               
chr28:29455928-29455656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 261
               

               
Conread position:
               
37-427
               

               
Cow position:
               
chr28:5128998-5128608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
43-261
               

               
Cow position:
               
chr28:8382068-8382294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
43-429
               

               
Cow position:
               
chr28:33051754-33052156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 387
               

               
Conread position:
               
45-273
               

               
Cow position:
               
chr28:16253118-16252892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
45-457
               

               
Cow position:
               
chr28:26533279-26533691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
40, 235
               

               
Conread position:
               
46-439
               

               
Cow position:
               
chr28:3408479-3408087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
98, 221
               

               
Conread position:
               
47-427
               

               
Cow position:
               
chr28:13865584-13865959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
50-282
               

               
Cow position:
               
chr28:6861695-6861930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
50-418
               

               
Cow position:
               
chr28:1099900-1099554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
50-462
               

               
Cow position:
               
chr28:19026261-19025852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
50-521
               

               
Cow position:
               
chr28:34229971-34230430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 216
               

               
Conread position:
               
50-523
               

               
Cow position:
               
chr28:29434683-29434206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
34, 149
               

               
Conread position:
               
52-427
               

               
Cow position:
               
chr28:14649091-14649460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 250
               

               
Conread position:
               
52-441
               

               
Cow position:
               
chr28:3493040-3492652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 239
               

               
Conread position:
               
53-286
               

               
Cow position:
               
chr28:15688786-15689021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 116
               

               
Conread position:
               
53-417
               

               
Cow position:
               
chr28:2862606-2862977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 216
               

               
Conread position:
               
53-420
               

               
Cow position:
               
chr28:34133609-34133973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
98, 172
               

               
Conread position:
               
53-425
               

               
Cow position:
               
chr28:26719105-26719460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
53-426
               

               
Cow position:
               
chr28:10172669-10172299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
56-277
               

               
Cow position:
               
chr28:8348905-8348680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
23, 196
               

               
Conread position:
               
56-347
               

               
Cow position:
               
chr28:25424554-25424256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
91, 136
               

               
Conread position:
               
56-365
               

               
Cow position:
               
chr28:4057734-4058039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
56-418
               

               
Cow position:
               
chr28:14512274-14512643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
56-423
               

               
Cow position:
               
chr28:23621296-23621652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
95, 159
               

               
Conread position:
               
56-432
               

               
Cow position:
               
chr28:13607633-13608022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
29, 143
               

               
Conread position:
               
56-443
               

               
Cow position:
               
chr28:16386758-16386384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
56-515
               

               
Cow position:
               
chr28:27218068-27218518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
24, 237
               

               
Conread position:
               
56-522
               

               
Cow position:
               
chr28:5236852-5236395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
57-277
               

               
Cow position:
               
chr28:27428501-27428715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
57-387
               

               
Cow position:
               
chr28:21502144-21502471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
99, 178
               

               
Conread position:
               
57-413
               

               
Cow position:
               
chr28:26922615-26922263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
57-432
               

               
Cow position:
               
chr28:19080099-19079722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
27, 205
               

               
Conread position:
               
57-434
               

               
Cow position:
               
chr28:5074754-5074383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
234, 35
               

               
Conread position:
               
57-443
               

               
Cow position:
               
chr28:16370325-16369949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 188
               

               
Conread position:
               
57-530
               

               
Cow position:
               
chr28:22345768-22346230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
58-296
               

               
Cow position:
               
chr28:2905330-2905564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
58-404
               

               
Cow position:
               
chr28:26103465-26103798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
58-448
               

               
Cow position:
               
chr28:22321172-22321557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
93, 220
               

               
Conread position:
               
59-328
               

               
Cow position:
               
chr28:7980665-7980398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
87, 7
               

               
Conread position:
               
63-327
               

               
Cow position:
               
chr28:24646295-24646557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 172
               

               
Conread position:
               
63-432
               

               
Cow position:
               
chr28:14508612-14508245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
63-432
               

               
Cow position:
               
chr28:20963777-20963405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
75, 111
               

               
Conread position:
               
63-439
               

               
Cow position:
               
chr28:25596387-25596758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 162
               

               
Conread position:
               
64-391
               

               
Cow position:
               
chr28:23793545-23793226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
64-425
               

               
Cow position:
               
chr28:9740227-9740583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 113
               

               
Conread position:
               
65-418
               

               
Cow position:
               
chr28:13176922-13176579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
66-423
               

               
Cow position:
               
chr28:4841639-4841275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
18, 171
               

               
Conread position:
               
66-439
               

               
Cow position:
               
chr28:25249113-25249484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
69-425
               

               
Cow position:
               
chr28:9636696-9636340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 160
               

               
Conread position:
               
69-433
               

               
Cow position:
               
chr28:11423043-11422690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
69-531
               

               
Cow position:
               
chr28:26220022-26220489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
71-264
               

               
Cow position:
               
chr28:5658317-5658510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
71-290
               

               
Cow position:
               
chr28:23775808-23776030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 150
               

               
Conread position:
               
71-522
               

               
Cow position:
               
chr28:9285615-9285177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 213
               

               
Conread position:
               
72-517
               

               
Cow position:
               
chr28:34430663-34430228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
13, 221
               

               
Conread position:
               
74-446
               

               
Cow position:
               
chr28:11884757-11884384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
77-295
               

               
Cow position:
               
chr28:8656966-8656753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
77-389
               

               
Cow position:
               
chr28:26340106-26340413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
78-382
               

               
Cow position:
               
chr28:9099705-9100007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 158
               

               
Conread position:
               
78-522
               

               
Cow position:
               
chr28:12951203-12951616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
78-523
               

               
Cow position:
               
chr28:5144752-5144313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
44, 155
               

               
Conread position:
               
78-531
               

               
Cow position:
               
chr28:8408510-8408967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
269, 40
               

               
Conread position:
               
80-522
               

               
Cow position:
               
chr28:4884495-4884053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 155
               

               
Conread position:
               
81-441
               

               
Cow position:
               
chr28:10053565-10053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
54, 228
               

               
Conread position:
               
82-205
               

               
Cow position:
               
chr28:8629002-8628877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
87-282
               

               
Cow position:
               
chr28:9108221-9108422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 199
               

               
Conread position:
               
88-275
               

               
Cow position:
               
chr28:5188621-5188435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
88-390
               

               
Cow position:
               
chr28:18625003-18625316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 218
               

               
Conread position:
               
88-522
               

               
Cow position:
               
chr28:16204552-16204130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 197
               

               
Conread position:
               
89-369
               

               
Cow position:
               
chr28:2738030-2737745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 138
               

               
Conread position:
               
94-516
               

               
Cow position:
               
chr28:1837777-1838190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
97-424
               

               
Cow position:
               
chr28:29416927-29416601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
48, 126
               

               
Conread position:
               
98-521
               

               
Cow position:
               
chr28:5437301-5436887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 207
               

               
Conread position:
               
105-425
               

               
Cow position:
               
chr28:23724659-23724342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 159
               

               
Conread position:
               
106-514
               

               
Cow position:
               
chr28:4090246-4089867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr28:8935734-8935911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
108-390
               

               
Cow position:
               
chr28:27313948-27313650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 152
               

               
Conread position:
               
108-404
               

               
Cow position:
               
chr28:18186345-18186652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 190
               

               
Conread position:
               
115-439
               

               
Cow position:
               
chr28:30937859-30937541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
36, 134
               

               
Conread position:
               
117-464
               

               
Cow position:
               
chr28:3169381-3169035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
117-531
               

               
Cow position:
               
chr28:4835036-4834634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 134
               

               
Conread position:
               
120-515
               

               
Cow position:
               
chr28:26982934-26982543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 169
               

               
Conread position:
               
121-429
               

               
Cow position:
               
chr28:4881431-4881120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 168
               

               
Conread position:
               
122-283
               

               
Cow position:
               
chr28:18760228-18760068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
147, 29
               

               
Conread position:
               
122-441
               

               
Cow position:
               
chr28:11866855-11866533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
123-489
               

               
Cow position:
               
chr28:13290319-13289972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
124-439
               

               
Cow position:
               
chr28:9684504-9684203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
130-324
               

               
Cow position:
               
chr28:657625-657436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
130-433
               

               
Cow position:
               
chr28:2132100-2131800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
133-390
               

               
Cow position:
               
chr28:26264629-26264909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
133-531
               

               
Cow position:
               
chr28:4643939-4643561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
134-522
               

               
Cow position:
               
chr28:11829111-11828759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
137-432
               

               
Cow position:
               
chr28:23668954-23668657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 157
               

               
Conread position:
               
137-439
               

               
Cow position:
               
chr28:4016368-4016661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
137-534
               

               
Cow position:
               
chr28:2752666-2752264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
138-423
               

               
Cow position:
               
chr28:32365675-32365958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
6, 83
               

               
Conread position:
               
142-522
               

               
Cow position:
               
chr28:29989278-29988908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
149-414
               

               
Cow position:
               
chr28:2872761-2873024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 97
               

               
Conread position:
               
151-338
               

               
Cow position:
               
chr28:7608134-7607947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
150, 131
               

               
Conread position:
               
152-441
               

               
Cow position:
               
chr28:10863935-10863660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
197, 66
               

               
Conread position:
               
152-521
               

               
Cow position:
               
chr28:4158805-4159163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 81
               

               
Conread position:
               
152-530
               

               
Cow position:
               
chr28:24082117-24082478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
155-422
               

               
Cow position:
               
chr28:16841896-16841654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
155-425
               

               
Cow position:
               
chr28:30746878-30746612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
192, 105
               

               
Conread position:
               
165-377
               

               
Cow position:
               
chr28:10057732-10057518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
165-523
               

               
Cow position:
               
chr28:27161470-27161115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
170-427
               

               
Cow position:
               
chr28:7009110-7008859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
180, 43
               

               
Conread position:
               
173-439
               

               
Cow position:
               
chr28:8140350-8140612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
176, 102
               

               
Conread position:
               
179-520
               

               
Cow position:
               
chr28:4645089-4644751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
184-425
               

               
Cow position:
               
chr28:11079185-11079418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
163, 116
               

               
Conread position:
               
190-531
               

               
Cow position:
               
chr28:25128768-25129093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 120
               

               
Conread position:
               
194-425
               

               
Cow position:
               
chr28:22813154-22813375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
194-541
               

               
Cow position:
               
chr28:5577414-5577751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
137, 88
               

               
Conread position:
               
203-534
               

               
Cow position:
               
chr28:13233211-13232874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
166, 78
               

               
Conread position:
               
204-518
               

               
Cow position:
               
chr28:7372223-7371914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
143, 75
               

               
Conread position:
               
207-533
               

               
Cow position:
               
chr28:3011371-3011056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
210-433
               

               
Cow position:
               
chr28:16246158-16245941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
218-531
               

               
Cow position:
               
chr28:2523853-2524151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
222-531
               

               
Cow position:
               
chr28:4181920-4182210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
131, 57
               

               
Conread position:
               
223-427
               

               
Cow position:
               
chr28:7927092-7927293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
223-429
               

               
Cow position:
               
chr28:3740798-3740996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
223-443
               

               
Cow position:
               
chr28:7350575-7350788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
223-515
               

               
Cow position:
               
chr28:4045770-4046037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
223-522
               

               
Cow position:
               
chr28:20759782-20759493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
126, 23
               

               
Conread position:
               
224-393
               

               
Cow position:
               
chr28:5139078-5138906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
224-446
               

               
Cow position:
               
chr28:12070154-12070368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
233-429
               

               
Cow position:
               
chr28:11348357-11348542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
234-429
               

               
Cow position:
               
chr28:4179482-4179672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
239-531
               

               
Cow position:
               
chr28:4013020-4013292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
240-522
               

               
Cow position:
               
chr28:3411057-3410789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
243-427
               

               
Cow position:
               
chr28:10977780-10977960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
243-436
               

               
Cow position:
               
chr28:7619215-7619023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
243-512
               

               
Cow position:
               
chr28:3445545-3445290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
248-445
               

               
Cow position:
               
chr28:26531339-26531143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr28:4438655-4438830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
253-424
               

               
Cow position:
               
chr28:2762141-2762311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
263-441
               

               
Cow position:
               
chr28:7498192-7498015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
279-522
               

               
Cow position:
               
chr28:17739798-17740025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
282-441
               

               
Cow position:
               
chr28:5254845-5255006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
289-439
               

               
Cow position:
               
chr28:8304229-8304377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
299-433
               

               
Cow position:
               
chr28:8396325-8396459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 124
               

               
Conread position:
               
300-522
               

               
Cow position:
               
chr28:9705644-9705856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
188, 49
               

               
Conread position:
               
301-443
               

               
Cow position:
               
chr28:4364830-4364690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
308-522
               

               
Cow position:
               
chr28:4873346-4873124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 116
               

               
Conread position:
               
310-537
               

               
Cow position:
               
chr28:28501234-28501456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
312-439
               

               
Cow position:
               
chr28:7132084-7131956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 37
               

               
Conread position:
               
312-441
               

               
Cow position:
               
chr28:24996610-24996482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
312-443
               

               
Cow position:
               
chr28:7557731-7557599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
312-466
               

               
Cow position:
               
chr28:30902129-30902284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
312-533
               

               
Cow position:
               
chr28:16879576-16879801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
317-427
               

               
Cow position:
               
chr28:9109224-9109333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
339-529
               

               
Cow position:
               
chr28:6053301-6053490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
340-517
               

               
Cow position:
               
chr28:3264077-3264251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
348-522
               

               
Cow position:
               
chr28:19024473-19024650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
349-522
               

               
Cow position:
               
chr28:3759031-3759197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
352-531
               

               
Cow position:
               
chr28:3000282-3000095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
361-531
               

               
Cow position:
               
chr28:8383914-8384081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               
Show alignments to all cow chromosomes.