Cow genome map

Conread name: Ova1-OVRM10061A04

Conread position: 1-196
Cow position: chrX:25283426-25283238 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 25

Conread position: 1-227
Cow position: chrX:48370810-48371043 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 1-242
Cow position: chrX:7806092-7806338 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 22

Conread position: 1-248
Cow position: chrX:4123549-4123802 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 84, 152

Conread position: 1-256
Cow position: chrX:25458923-25458660 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 1-258
Cow position: chrX:30454908-30454643 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 1-258
Cow position: chrX:32094736-32094471 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 1-261
Cow position: chrX:21785482-21785745 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 85, 14

Conread position: 1-262
Cow position: chrX:2478913-2478645 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 84, 62

Conread position: 1-262
Cow position: chrX:14162905-14163174 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 114

Conread position: 1-262
Cow position: chrX:15590158-15589892 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 1-262
Cow position: chrX:23280720-23280986 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 84, 168

Conread position: 1-262
Cow position: chrX:25946120-25945854 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 95, 33

Conread position: 1-262
Cow position: chrX:26531672-26531941 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 1-262
Cow position: chrX:27095833-27096093 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 133

Conread position: 1-262
Cow position: chrX:46606796-46606530 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 146, 83

Conread position: 1-267
Cow position: chrX:33020200-33020467 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 156, 199

Conread position: 1-275
Cow position: chrX:38439187-38439469 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 1-275
Cow position: chrX:42462034-42461753 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-275
Cow position: chrX:42994328-42994604 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 126

Conread position: 1-276
Cow position: chrX:25232300-25232583 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 1-277
Cow position: chrX:15485911-15485631 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 78, 33

Conread position: 1-281
Cow position: chrX:160318-160035 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 180
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 144, 36

Conread position: 1-282
Cow position: chrX:19188650-19188937 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 83, 0

Conread position: 1-283
Cow position: chrX:6655553-6655263 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 1-283
Cow position: chrX:16711668-16711955 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 84, 149

Conread position: 1-283
Cow position: chrX:16713911-16714201 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 188
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 213

Conread position: 1-283
Cow position: chrX:31202554-31202841 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 84, 271

Conread position: 1-283
Cow position: chrX:40544896-40544607 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 272

Conread position: 1-283
Cow position: chrX:42733579-42733859 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 78, 171

Conread position: 1-283
Cow position: chrX:48310027-48309739 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 55

Conread position: 1-284
Cow position: chrX:10428254-10428544 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 27

Conread position: 1-284
Cow position: chrX:14819426-14819719 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 84, 271

Conread position: 1-284
Cow position: chrX:16706513-16706807 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 191
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 1-284
Cow position: chrX:20945282-20945565 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 84, 103

Conread position: 1-284
Cow position: chrX:23386825-23386541 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 134

Conread position: 1-284
Cow position: chrX:40648380-40648651 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 84, 39

Conread position: 1-286
Cow position: chrX:14924714-14925003 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 106

Conread position: 1-286
Cow position: chrX:17497810-17498087 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 152

Conread position: 1-286
Cow position: chrX:41403675-41403982 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-286
Cow position: chrX:41410223-41410530 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-290
Cow position: chrX:12115755-12116052 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 45

Conread position: 1-292
Cow position: chrX:35681049-35681349 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 144

Conread position: 1-292
Cow position: chrX:41743627-41743921 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 1-293
Cow position: chrX:9227270-9226970 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 85

Conread position: 1-293
Cow position: chrX:16703384-16703684 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 1-295
Cow position: chrX:7054021-7053718 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 119, 42

Conread position: 1-299
Cow position: chrX:9096381-9096685 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 149, 0

Conread position: 1-299
Cow position: chrX:22493721-22494027 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 1-299
Cow position: chrX:25452263-25452559 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 158, 110

Conread position: 1-299
Cow position: chrX:30143570-30143265 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 27

Conread position: 1-300
Cow position: chrX:2425408-2425097 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 1-300
Cow position: chrX:18078196-18077885 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 1-300
Cow position: chrX:35240578-35240886 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 1-300
Cow position: chrX:45786844-45787147 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 149, 94

Conread position: 1-300
Cow position: chrX:48205199-48204902 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 85, 178

Conread position: 1-302
Cow position: chrX:25237892-25238184 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 150, 62

Conread position: 1-302
Cow position: chrX:41103502-41103809 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 84, 269

Conread position: 1-304
Cow position: chrX:20582744-20583037 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 174

Conread position: 1-305
Cow position: chrX:3649094-3648794 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 33

Conread position: 1-305
Cow position: chrX:21749745-21749442 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 202
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 74, 133

Conread position: 1-305
Cow position: chrX:23451457-23451143 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 202
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 1-305
Cow position: chrX:23572086-23571773 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 296

Conread position: 1-324
Cow position: chrX:19015156-19015474 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 140

Conread position: 1-327
Cow position: chrX:11674772-11675106 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 42, 222

Conread position: 1-327
Cow position: chrX:30162711-30163040 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 150, 285

Conread position: 1-342
Cow position: chrX:34990755-34991091 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 143

Conread position: 1-352
Cow position: chrX:34192395-34192736 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 20

Conread position: 1-371
Cow position: chrX:5638454-5638084 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 127, 30

Conread position: 1-373
Cow position: chrX:20709789-20710161 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 249
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 38

Conread position: 1-376
Cow position: chrX:16783208-16783581 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 244
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 150, 83

Conread position: 1-378
Cow position: chrX:22821128-22821510 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 248
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 86

Conread position: 1-378
Cow position: chrX:23264723-23264341 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 84, 314

Conread position: 1-379
Cow position: chrX:18194627-18195008 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 246
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 312

Conread position: 1-379
Cow position: chrX:23299668-23300051 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 250
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 284

Conread position: 1-379
Cow position: chrX:23396320-23396695 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 241
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 134

Conread position: 1-379
Cow position: chrX:41157025-41157408 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 251
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 125

Conread position: 1-388
Cow position: chrX:28787081-28787451 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 246
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 306, 45

Conread position: 1-390
Cow position: chrX:23564083-23563687 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 278

Conread position: 1-390
Cow position: chrX:32171168-32170785 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 261
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 135

Conread position: 1-390
Cow position: chrX:34454383-34454761 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 269
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 78, 158

Conread position: 1-394
Cow position: chrX:40180156-40179771 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 246
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 42

Conread position: 1-399
Cow position: chrX:7571620-7572018 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 194

Conread position: 1-399
Cow position: chrX:46723027-46722621 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 276

Conread position: 1-399
Cow position: chrX:47967314-47967720 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 273
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 78, 50

Conread position: 1-399
Cow position: chrX:48195327-48194922 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 263
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 305

Conread position: 1-402
Cow position: chrX:26625971-26625555 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 282
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 58, 245

Conread position: 1-411
Cow position: chrX:47873627-47873212 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 270
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 113

Conread position: 1-414
Cow position: chrX:38227376-38226983 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 280
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 78, 147

Conread position: 1-417
Cow position: chrX:38094811-38094389 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 122

Conread position: 1-418
Cow position: chrX:7277642-7278043 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 283
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 17, 35

Conread position: 1-418
Cow position: chrX:10412272-10411852 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 80

Conread position: 1-418
Cow position: chrX:11614435-11614825 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 281
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 199, 78

Conread position: 1-423
Cow position: chrX:35224016-35224434 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 91

Conread position: 1-423
Cow position: chrX:42171582-42171160 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 33

Conread position: 1-425
Cow position: chrX:41122786-41123198 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 141

Conread position: 1-426
Cow position: chrX:630582-630170 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 275
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 20

Conread position: 1-426
Cow position: chrX:14884250-14883815 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 307

Conread position: 1-426
Cow position: chrX:17964801-17964382 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 278
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 147, 40

Conread position: 1-426
Cow position: chrX:31729172-31729582 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 282
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 103, 80

Conread position: 1-426
Cow position: chrX:32743252-32743673 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 269
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 167

Conread position: 1-426
Cow position: chrX:35268604-35269001 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 284
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 105

Conread position: 1-426
Cow position: chrX:37232126-37232547 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 33

Conread position: 1-426
Cow position: chrX:41526805-41526389 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 49

Conread position: 1-427
Cow position: chrX:15329367-15329783 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 281
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 150, 172

Conread position: 1-427
Cow position: chrX:20376684-20377104 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 269
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 39

Conread position: 1-427
Cow position: chrX:25419446-25419013 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 290
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 144, 44

Conread position: 1-427
Cow position: chrX:32309815-32310247 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 294
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 48, 221

Conread position: 1-427
Cow position: chrX:45414586-45414164 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 288

Conread position: 1-428
Cow position: chrX:34502637-34503062 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 33

Conread position: 1-429
Cow position: chrX:11718066-11717641 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 80

Conread position: 1-429
Cow position: chrX:12309674-12309243 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 33

Conread position: 1-429
Cow position: chrX:28866275-28865864 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 291
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 33

Conread position: 1-429
Cow position: chrX:38007054-38006629 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 118

Conread position: 1-429
Cow position: chrX:41238649-41238213 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 299
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 167, 80

Conread position: 1-429
Cow position: chrX:43527217-43527650 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 289
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 78, 288

Conread position: 1-432
Cow position: chrX:25337891-25338333 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 317

Conread position: 1-432
Cow position: chrX:33803302-33802862 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 281
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 355

Conread position: 1-433
Cow position: chrX:42470223-42469794 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 146

Conread position: 1-433
Cow position: chrX:43114887-43115296 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 57

Conread position: 1-441
Cow position: chrX:31436194-31436628 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 154

Conread position: 1-443
Cow position: chrX:6413760-6414197 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 122

Conread position: 1-445
Cow position: chrX:13648070-13647627 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 142

Conread position: 1-445
Cow position: chrX:24288199-24287774 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 288
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 40

Conread position: 1-449
Cow position: chrX:46771258-46770801 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 311
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 82, 276

Conread position: 1-479
Cow position: chrX:4044144-4043675 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 322
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 207

Conread position: 1-507
Cow position: chrX:31294826-31294360 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 48

Conread position: 1-514
Cow position: chrX:10831798-10831265 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 357
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 303

Conread position: 1-515
Cow position: chrX:28632764-28632265 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 316
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 55

Conread position: 1-516
Cow position: chrX:31250105-31250608 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 81

Conread position: 1-517
Cow position: chrX:26492716-26493226 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 332
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 84, 286

Conread position: 1-518
Cow position: chrX:40557962-40557438 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 142

Conread position: 1-521
Cow position: chrX:30133610-30133101 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 112

Conread position: 1-522
Cow position: chrX:4633137-4632630 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 22

Conread position: 1-522
Cow position: chrX:5872030-5872556 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 37

Conread position: 1-522
Cow position: chrX:7695477-7695987 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 39

Conread position: 1-522
Cow position: chrX:9252460-9251939 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 45

Conread position: 1-522
Cow position: chrX:10866153-10865646 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 294

Conread position: 1-522
Cow position: chrX:12249515-12250039 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 350
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 136

Conread position: 1-522
Cow position: chrX:21593000-21593515 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 37

Conread position: 1-522
Cow position: chrX:30338205-30337730 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 346
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 10, 49

Conread position: 1-522
Cow position: chrX:34565014-34565509 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 32

Conread position: 1-522
Cow position: chrX:44054519-44055027 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 33

Conread position: 1-522
Cow position: chrX:46532806-46532266 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 358
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 41, 323

Conread position: 1-523
Cow position: chrX:5017692-5017191 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 55

Conread position: 1-523
Cow position: chrX:38218432-38218938 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 45

Conread position: 1-523
Cow position: chrX:46033004-46032503 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 334
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 177, 80

Conread position: 1-526
Cow position: chrX:18695207-18694694 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 173

Conread position: 1-526
Cow position: chrX:40269190-40269736 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 316

Conread position: 1-528
Cow position: chrX:1176260-1175760 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 347
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 145, 77

Conread position: 1-530
Cow position: chrX:34238435-34238956 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 223

Conread position: 1-530
Cow position: chrX:37072120-37072618 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 134

Conread position: 1-531
Cow position: chrX:6543970-6544478 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 247

Conread position: 1-531
Cow position: chrX:12290451-12290951 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 346
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 9

Conread position: 1-531
Cow position: chrX:20340177-20339662 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 140

Conread position: 1-531
Cow position: chrX:22482975-22482456 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 247

Conread position: 1-531
Cow position: chrX:34441733-34441220 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 44

Conread position: 1-533
Cow position: chrX:27705307-27705825 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 80

Conread position: 1-533
Cow position: chrX:29048746-29049273 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 328
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 119, 33

Conread position: 1-533
Cow position: chrX:42247462-42246947 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 33

Conread position: 1-536
Cow position: chrX:15147470-15146961 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 16

Conread position: 1-539
Cow position: chrX:5118769-5118256 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 34

Conread position: 2-244
Cow position: chrX:40121300-40121054 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 2-262
Cow position: chrX:18244704-18244968 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 84, 67

Conread position: 2-262
Cow position: chrX:29780460-29780724 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 83, 138

Conread position: 2-283
Cow position: chrX:35409383-35409660 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 194, 79

Conread position: 2-284
Cow position: chrX:11806302-11806013 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 82, 146

Conread position: 2-304
Cow position: chrX:23122100-23122410 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 82, 13

Conread position: 2-306
Cow position: chrX:16289847-16289537 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 83, 270

Conread position: 2-379
Cow position: chrX:24587739-24587357 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 245
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 85, 313

Conread position: 2-379
Cow position: chrX:27105973-27106352 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 256
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 293

Conread position: 2-399
Cow position: chrX:45089152-45089559 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 262
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 114

Conread position: 2-411
Cow position: chrX:20029962-20030378 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 268
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 298

Conread position: 2-420
Cow position: chrX:11082898-11082488 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 229

Conread position: 2-424
Cow position: chrX:28134064-28134476 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 39

Conread position: 2-426
Cow position: chrX:45430303-45429882 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 222

Conread position: 2-427
Cow position: chrX:20697888-20697468 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 39

Conread position: 2-432
Cow position: chrX:7645973-7646402 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 152

Conread position: 2-432
Cow position: chrX:38963827-38964253 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 39

Conread position: 2-437
Cow position: chrX:45967877-45968299 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 278
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 82, 184

Conread position: 2-459
Cow position: chrX:878653-878208 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 44

Conread position: 2-462
Cow position: chrX:33639680-33640150 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 229

Conread position: 2-532
Cow position: chrX:40827032-40826516 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 126

Conread position: 2-536
Cow position: chrX:7351017-7351539 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 32

Conread position: 3-196
Cow position: chrX:7382039-7382235 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 3-236
Cow position: chrX:23061170-23061398 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 133, 0

Conread position: 3-277
Cow position: chrX:35388191-35387909 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-284
Cow position: chrX:24317782-24318064 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 165, 66

Conread position: 3-379
Cow position: chrX:32584097-32583716 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 253
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 83, 268

Conread position: 3-391
Cow position: chrX:31949215-31948830 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 164

Conread position: 3-399
Cow position: chrX:9161304-9161688 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 218, 195

Conread position: 3-512
Cow position: chrX:35273060-35273586 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 235

Conread position: 3-522
Cow position: chrX:40481157-40480624 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 351
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 54, 93

Conread position: 5-284
Cow position: chrX:2963768-2964051 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 173

Conread position: 5-284
Cow position: chrX:42874696-42874984 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 5-522
Cow position: chrX:34376675-34377163 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 93

Conread position: 6-257
Cow position: chrX:44731319-44731571 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 37

Conread position: 6-274
Cow position: chrX:28845563-28845821 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 127

Conread position: 6-277
Cow position: chrX:42086581-42086850 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 78, 65

Conread position: 6-300
Cow position: chrX:1947002-1946697 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 293

Conread position: 6-378
Cow position: chrX:34663140-34662754 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 271
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 152

Conread position: 6-379
Cow position: chrX:1055669-1055288 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 78

Conread position: 6-379
Cow position: chrX:2467599-2467977 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 46

Conread position: 6-422
Cow position: chrX:47481517-47481932 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 316

Conread position: 6-429
Cow position: chrX:31443102-31442687 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 225

Conread position: 6-433
Cow position: chrX:33855522-33855074 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 314

Conread position: 6-441
Cow position: chrX:16762491-16762927 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 304
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 51

Conread position: 6-526
Cow position: chrX:17794714-17795207 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 28

Conread position: 6-532
Cow position: chrX:25035667-25035144 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 26

Conread position: 7-255
Cow position: chrX:31260911-31260656 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 52

Conread position: 7-258
Cow position: chrX:9997611-9997361 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 25

Conread position: 7-282
Cow position: chrX:40647698-40647984 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 144, 0

Conread position: 7-427
Cow position: chrX:1616331-1615907 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 289

Conread position: 7-429
Cow position: chrX:8730799-8731235 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 319

Conread position: 7-446
Cow position: chrX:161148-161569 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 289
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 72, 92

Conread position: 7-516
Cow position: chrX:34554450-34554942 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 76, 62

Conread position: 7-522
Cow position: chrX:4996331-4996813 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 104

Conread position: 7-522
Cow position: chrX:13912799-13913299 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 200

Conread position: 7-531
Cow position: chrX:41879211-41878704 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 74

Conread position: 8-423
Cow position: chrX:34532252-34532656 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 67

Conread position: 8-427
Cow position: chrX:12437515-12437132 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 31

Conread position: 8-439
Cow position: chrX:34401718-34402158 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 282

Conread position: 8-457
Cow position: chrX:14599253-14599702 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 61

Conread position: 8-512
Cow position: chrX:47344015-47344513 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 326
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 77, 201

Conread position: 10-305
Cow position: chrX:38102721-38102423 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 156, 202

Conread position: 10-417
Cow position: chrX:35413353-35413741 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 145

Conread position: 10-535
Cow position: chrX:30921908-30922408 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 341
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 31

Conread position: 11-522
Cow position: chrX:11655803-11656302 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 276

Conread position: 12-327
Cow position: chrX:47191670-47191367 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 36

Conread position: 12-388
Cow position: chrX:7496974-7497344 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 139, 16

Conread position: 13-417
Cow position: chrX:917644-917237 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 75

Conread position: 14-284
Cow position: chrX:37416348-37416071 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 15-291
Cow position: chrX:43408729-43409014 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 34

Conread position: 19-251
Cow position: chrX:10755943-10756171 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 119

Conread position: 19-385
Cow position: chrX:47144814-47145184 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 247
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 197

Conread position: 19-399
Cow position: chrX:45404102-45403712 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 283

Conread position: 19-449
Cow position: chrX:17541696-17542121 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 290
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 149, 213

Conread position: 20-277
Cow position: chrX:32020389-32020126 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 59, 0

Conread position: 20-461
Cow position: chrX:17725711-17726150 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 61

Conread position: 21-379
Cow position: chrX:488224-488597 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 248
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 127, 208

Conread position: 25-360
Cow position: chrX:678832-678481 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 11, 166

Conread position: 28-418
Cow position: chrX:20151591-20151988 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 270
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 125

Conread position: 32-427
Cow position: chrX:14973987-14973605 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 261
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 87, 46

Conread position: 34-431
Cow position: chrX:11073444-11073045 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 34-432
Cow position: chrX:41673850-41674250 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 272
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 6

Conread position: 34-511
Cow position: chrX:28878415-28877953 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 315
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 42, 114

Conread position: 34-531
Cow position: chrX:24366082-24365589 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 330
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 127, 35

Conread position: 34-536
Cow position: chrX:25816149-25815660 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 331
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 50, 118

Conread position: 35-275
Cow position: chrX:23497915-23497677 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 116, 46

Conread position: 37-466
Cow position: chrX:13177717-13177294 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 13

Conread position: 39-252
Cow position: chrX:40116176-40116389 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 51

Conread position: 40-418
Cow position: chrX:27432166-27431786 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 257

Conread position: 41-340
Cow position: chrX:40788956-40789265 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 203
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 183

Conread position: 41-515
Cow position: chrX:9416940-9416440 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 235

Conread position: 43-410
Cow position: chrX:20677121-20677489 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 248
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 27

Conread position: 44-379
Cow position: chrX:15814855-15815177 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 7

Conread position: 44-425
Cow position: chrX:9635424-9635052 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 166

Conread position: 44-432
Cow position: chrX:19930414-19930789 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 257
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 12

Conread position: 45-275
Cow position: chrX:42282194-42282419 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 122, 29

Conread position: 45-283
Cow position: chrX:30833080-30832848 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 123, 40

Conread position: 45-426
Cow position: chrX:4768508-4768872 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 95

Conread position: 45-460
Cow position: chrX:27772198-27771795 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 281
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 106, 42

Conread position: 46-292
Cow position: chrX:35284376-35284632 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 113

Conread position: 47-291
Cow position: chrX:44053018-44053266 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 47-356
Cow position: chrX:26876121-26875811 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 51

Conread position: 49-268
Cow position: chrX:2648588-2648369 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 49-302
Cow position: chrX:1728655-1728409 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 110, 32

Conread position: 49-426
Cow position: chrX:17662835-17662458 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 276

Conread position: 50-392
Cow position: chrX:27680166-27680504 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 31

Conread position: 50-399
Cow position: chrX:7508902-7509252 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 68

Conread position: 50-414
Cow position: chrX:42492747-42492396 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 101, 19

Conread position: 50-423
Cow position: chrX:11939161-11938797 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 34

Conread position: 50-426
Cow position: chrX:45598841-45598465 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 242
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 146

Conread position: 50-439
Cow position: chrX:17888643-17888271 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 261
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 76

Conread position: 50-511
Cow position: chrX:6690485-6690030 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 312
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 103

Conread position: 51-425
Cow position: chrX:37119363-37119731 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 245
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 28, 82

Conread position: 51-426
Cow position: chrX:16284183-16283803 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 249
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 223

Conread position: 51-523
Cow position: chrX:27394250-27393793 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 102

Conread position: 53-246
Cow position: chrX:2206778-2206588 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 114

Conread position: 53-294
Cow position: chrX:2029156-2029402 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 167

Conread position: 53-390
Cow position: chrX:38935047-38935383 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 174

Conread position: 53-399
Cow position: chrX:21004450-21004797 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 98, 34

Conread position: 53-414
Cow position: chrX:44961513-44961879 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 247

Conread position: 53-435
Cow position: chrX:22624247-22624625 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 254
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 31, 61

Conread position: 53-449
Cow position: chrX:33493541-33493939 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 160

Conread position: 53-520
Cow position: chrX:34543553-34544008 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 313
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 26, 68

Conread position: 53-522
Cow position: chrX:38549214-38549671 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 53-531
Cow position: chrX:38642026-38642475 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 28

Conread position: 53-532
Cow position: chrX:23514252-23513772 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 55-507
Cow position: chrX:22821815-22822264 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 299
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 152

Conread position: 56-379
Cow position: chrX:40809459-40809786 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 101, 18

Conread position: 56-394
Cow position: chrX:48010363-48010712 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 254

Conread position: 56-421
Cow position: chrX:37910222-37910579 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 27, 14

Conread position: 56-425
Cow position: chrX:32431396-32431763 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 232
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 39

Conread position: 56-429
Cow position: chrX:6278737-6278356 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 260
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 22, 245

Conread position: 56-429
Cow position: chrX:9201316-9201690 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 227

Conread position: 56-429
Cow position: chrX:36975718-36976093 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 26, 167

Conread position: 56-446
Cow position: chrX:45174613-45175011 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 266
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 25, 179

Conread position: 56-517
Cow position: chrX:30963103-30962656 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 240

Conread position: 56-531
Cow position: chrX:17231503-17231970 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 313
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 23, 113

Conread position: 57-231
Cow position: chrX:42499259-42499077 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 57-497
Cow position: chrX:21672321-21672761 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 300
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 228

Conread position: 57-508
Cow position: chrX:35542661-35543094 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 238

Conread position: 57-518
Cow position: chrX:37489500-37489949 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 307
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 96

Conread position: 57-522
Cow position: chrX:42381330-42380888 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 115

Conread position: 58-271
Cow position: chrX:7513287-7513497 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 23, 30

Conread position: 58-275
Cow position: chrX:13265849-13265634 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 26, 115

Conread position: 62-432
Cow position: chrX:39126113-39126472 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 240
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 239, 19

Conread position: 63-252
Cow position: chrX:43049118-43049317 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 63-260
Cow position: chrX:4942974-4942780 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 90

Conread position: 63-264
Cow position: chrX:25411616-25411821 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 18

Conread position: 63-269
Cow position: chrX:48684447-48684239 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 90

Conread position: 63-274
Cow position: chrX:29509668-29509451 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 63-284
Cow position: chrX:10437889-10437669 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 136

Conread position: 63-296
Cow position: chrX:4750522-4750292 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 88, 18

Conread position: 63-365
Cow position: chrX:11589816-11589509 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 85

Conread position: 63-389
Cow position: chrX:21642702-21642379 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 86, 47

Conread position: 63-399
Cow position: chrX:11856205-11856543 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 44

Conread position: 63-419
Cow position: chrX:39558572-39558216 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 110

Conread position: 63-420
Cow position: chrX:619232-618875 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 245

Conread position: 63-427
Cow position: chrX:17042466-17042823 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 238
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 212

Conread position: 63-462
Cow position: chrX:41884642-41884237 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 242

Conread position: 63-522
Cow position: chrX:13382100-13382566 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 311
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 21, 223

Conread position: 63-530
Cow position: chrX:22074576-22075027 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 168

Conread position: 64-381
Cow position: chrX:6488363-6488671 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 84

Conread position: 64-390
Cow position: chrX:16541899-16541553 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 20

Conread position: 64-417
Cow position: chrX:1514624-1514288 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 20, 84

Conread position: 64-429
Cow position: chrX:6265809-6265457 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 96

Conread position: 64-440
Cow position: chrX:7721761-7722143 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 161

Conread position: 64-527
Cow position: chrX:44396792-44397240 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 314
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 51, 143

Conread position: 65-420
Cow position: chrX:29120836-29121181 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 284, 19

Conread position: 65-425
Cow position: chrX:46073044-46072678 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 65-427
Cow position: chrX:10959625-10959254 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 235
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 235

Conread position: 65-432
Cow position: chrX:1503117-1503473 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 86, 175

Conread position: 66-437
Cow position: chrX:23091660-23092023 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 138

Conread position: 66-533
Cow position: chrX:11633457-11633915 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 251

Conread position: 67-452
Cow position: chrX:32623362-32623735 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 17, 98

Conread position: 68-531
Cow position: chrX:27174776-27175233 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 316
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 21, 203

Conread position: 69-377
Cow position: chrX:29032199-29032502 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 203
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 152, 12

Conread position: 69-420
Cow position: chrX:48236593-48236951 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 233

Conread position: 69-424
Cow position: chrX:37574638-37574979 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 96

Conread position: 70-529
Cow position: chrX:29602050-29601598 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 103

Conread position: 73-271
Cow position: chrX:46315593-46315390 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 11

Conread position: 73-522
Cow position: chrX:12980045-12979611 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 313
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 11, 173

Conread position: 75-441
Cow position: chrX:9425953-9425598 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 123

Conread position: 76-522
Cow position: chrX:3579735-3580169 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 293
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 75, 8

Conread position: 78-257
Cow position: chrX:46430066-46429887 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 169

Conread position: 78-429
Cow position: chrX:45110447-45110798 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 69, 110

Conread position: 78-434
Cow position: chrX:45845887-45846248 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 228

Conread position: 78-531
Cow position: chrX:38852988-38853444 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 169

Conread position: 78-533
Cow position: chrX:29542427-29541993 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 216

Conread position: 81-275
Cow position: chrX:36961429-36961634 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 81-429
Cow position: chrX:46587612-46587964 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 92

Conread position: 81-446
Cow position: chrX:32420013-32420369 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 70, 185

Conread position: 82-359
Cow position: chrX:6234653-6234376 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 83

Conread position: 83-251
Cow position: chrX:10252385-10252214 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 23

Conread position: 83-275
Cow position: chrX:17908487-17908297 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 85, 72

Conread position: 83-427
Cow position: chrX:29545083-29544738 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 62

Conread position: 84-531
Cow position: chrX:37781320-37780879 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 224

Conread position: 87-284
Cow position: chrX:8991688-8991886 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 79

Conread position: 87-376
Cow position: chrX:12405576-12405291 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 109, 40

Conread position: 88-387
Cow position: chrX:43780051-43779746 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 201
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 196

Conread position: 88-531
Cow position: chrX:40035643-40035209 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 88

Conread position: 89-379
Cow position: chrX:33000706-33000998 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 79, 210

Conread position: 89-522
Cow position: chrX:34411643-34412072 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 103

Conread position: 94-262
Cow position: chrX:45874806-45874977 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 94-521
Cow position: chrX:8869601-8869181 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 109

Conread position: 95-429
Cow position: chrX:43730406-43730081 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 83, 73

Conread position: 96-404
Cow position: chrX:47362802-47362505 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 77

Conread position: 96-555
Cow position: chrX:31311835-31312316 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 150

Conread position: 106-277
Cow position: chrX:31256687-31256859 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 106-461
Cow position: chrX:36067839-36068191 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 73

Conread position: 106-515
Cow position: chrX:32820849-32821257 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 9

Conread position: 108-268
Cow position: chrX:45759219-45759376 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 108-390
Cow position: chrX:36060973-36061264 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 195

Conread position: 108-463
Cow position: chrX:42235712-42235349 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 197

Conread position: 114-532
Cow position: chrX:27145451-27145833 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 288
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 37, 126

Conread position: 115-429
Cow position: chrX:35885901-35885585 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 147

Conread position: 115-447
Cow position: chrX:31252246-31252567 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 165

Conread position: 116-425
Cow position: chrX:21986461-21986152 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 7

Conread position: 119-294
Cow position: chrX:1505544-1505720 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 128

Conread position: 120-284
Cow position: chrX:14003811-14003641 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 166

Conread position: 120-369
Cow position: chrX:13785524-13785280 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 24

Conread position: 120-379
Cow position: chrX:22921147-22921414 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 15

Conread position: 120-426
Cow position: chrX:34792477-34792173 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 56

Conread position: 120-448
Cow position: chrX:46433316-46433653 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 181

Conread position: 120-464
Cow position: chrX:169692-169369 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 80, 27

Conread position: 120-522
Cow position: chrX:22387414-22387019 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 278
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 167

Conread position: 120-531
Cow position: chrX:6407382-6407777 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 270
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 101

Conread position: 122-421
Cow position: chrX:7336664-7336976 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 141

Conread position: 133-514
Cow position: chrX:27227970-27228345 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 264
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 161

Conread position: 136-429
Cow position: chrX:45976774-45977068 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 13

Conread position: 137-420
Cow position: chrX:20584174-20584462 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 5

Conread position: 137-532
Cow position: chrX:29680409-29680013 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 142

Conread position: 138-429
Cow position: chrX:9365822-9365533 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 12, 125

Conread position: 142-425
Cow position: chrX:38728595-38728873 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 182
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 171

Conread position: 142-427
Cow position: chrX:39415510-39415229 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 92

Conread position: 142-433
Cow position: chrX:34313889-34314170 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 39

Conread position: 142-522
Cow position: chrX:8917252-8917619 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 242
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 138

Conread position: 143-530
Cow position: chrX:616405-616007 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 159

Conread position: 145-441
Cow position: chrX:5919356-5919651 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 76

Conread position: 146-399
Cow position: chrX:21566264-21566520 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 169

Conread position: 147-441
Cow position: chrX:14275869-14275589 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 131, 9

Conread position: 147-515
Cow position: chrX:34505184-34504836 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 140, 82

Conread position: 148-421
Cow position: chrX:7161925-7162191 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 177
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 141, 7

Conread position: 149-531
Cow position: chrX:40685466-40685097 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 153

Conread position: 150-456
Cow position: chrX:18204596-18204294 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 5

Conread position: 152-382
Cow position: chrX:27685115-27685345 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 126

Conread position: 152-428
Cow position: chrX:37986101-37986367 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 149, 77

Conread position: 152-439
Cow position: chrX:41870939-41871218 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 12, 72

Conread position: 152-517
Cow position: chrX:41027025-41027379 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 123, 46

Conread position: 153-426
Cow position: chrX:7710674-7710399 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 138

Conread position: 155-377
Cow position: chrX:26493766-26493542 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 132

Conread position: 155-440
Cow position: chrX:19273852-19273552 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 156-429
Cow position: chrX:11085185-11084921 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 103

Conread position: 163-576
Cow position: chrX:26881689-26881281 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 108

Conread position: 166-536
Cow position: chrX:34315407-34315769 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 244
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 137, 36

Conread position: 170-441
Cow position: chrX:42927933-42927670 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 106

Conread position: 170-522
Cow position: chrX:24331664-24332001 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 228
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 110

Conread position: 171-284
Cow position: chrX:20790808-20790921 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 171-423
Cow position: chrX:33539052-33539307 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 116

Conread position: 171-425
Cow position: chrX:9651138-9650885 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 119, 70

Conread position: 171-531
Cow position: chrX:29229896-29230240 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 99

Conread position: 171-531
Cow position: chrX:38654543-38654199 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 173-460
Cow position: chrX:29194123-29194403 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 176, 61

Conread position: 173-511
Cow position: chrX:46291028-46291354 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 126, 9

Conread position: 174-449
Cow position: chrX:45670117-45670384 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 20

Conread position: 177-399
Cow position: chrX:44836879-44837089 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 172, 21

Conread position: 180-439
Cow position: chrX:34837158-34836910 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 169, 43

Conread position: 182-521
Cow position: chrX:16348672-16348331 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 227
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 162

Conread position: 185-525
Cow position: chrX:10516157-10516481 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 224
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 44

Conread position: 188-426
Cow position: chrX:38560461-38560700 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 46, 76

Conread position: 189-522
Cow position: chrX:12095869-12095547 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 8, 102

Conread position: 193-518
Cow position: chrX:42855364-42855683 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 213
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 53

Conread position: 194-427
Cow position: chrX:918817-918575 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 83, 104

Conread position: 194-443
Cow position: chrX:29050157-29050404 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 105

Conread position: 194-523
Cow position: chrX:1466071-1466388 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 107

Conread position: 196-530
Cow position: chrX:47345246-47345562 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 153, 78

Conread position: 204-433
Cow position: chrX:5135605-5135374 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 143, 90

Conread position: 204-526
Cow position: chrX:39220000-39220316 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 87, 35

Conread position: 204-571
Cow position: chrX:4296899-4296549 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 241
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 145, 65

Conread position: 207-433
Cow position: chrX:4153112-4152885 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 94, 81

Conread position: 207-443
Cow position: chrX:4515607-4515847 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 78, 84

Conread position: 207-445
Cow position: chrX:23113201-23113444 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 71, 26

Conread position: 207-461
Cow position: chrX:23562558-23562805 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 142, 39

Conread position: 207-522
Cow position: chrX:22115394-22115090 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 10, 73

Conread position: 210-427
Cow position: chrX:18273132-18272918 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 62, 89

Conread position: 223-522
Cow position: chrX:15820536-15820829 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 193
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 58

Conread position: 223-522
Cow position: chrX:23561800-23562097 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 126, 68

Conread position: 223-532
Cow position: chrX:5134414-5134712 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 64

Conread position: 229-414
Cow position: chrX:19469561-19469378 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 63

Conread position: 229-426
Cow position: chrX:46429875-46429679 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 11

Conread position: 230-522
Cow position: chrX:35985764-35986039 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 55, 68

Conread position: 232-435
Cow position: chrX:22393038-22392837 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 66

Conread position: 234-514
Cow position: chrX:20957198-20957455 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 115, 42

Conread position: 235-425
Cow position: chrX:19943286-19943097 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 78

Conread position: 236-382
Cow position: chrX:44095209-44095356 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 75

Conread position: 238-433
Cow position: chrX:41192654-41192850 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 67, 44

Conread position: 239-427
Cow position: chrX:27306407-27306594 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 62

Conread position: 240-423
Cow position: chrX:2523722-2523545 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 36

Conread position: 240-521
Cow position: chrX:6599828-6599551 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 51

Conread position: 241-426
Cow position: chrX:11326143-11325958 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 38

Conread position: 242-418
Cow position: chrX:12082367-12082192 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 51, 59

Conread position: 243-523
Cow position: chrX:19394511-19394780 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 106, 57

Conread position: 244-429
Cow position: chrX:16984587-16984782 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 163

Conread position: 244-531
Cow position: chrX:24749047-24749320 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 35

Conread position: 244-533
Cow position: chrX:40532084-40531786 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 45

Conread position: 246-414
Cow position: chrX:29585082-29585247 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 103, 35

Conread position: 246-427
Cow position: chrX:4289401-4289584 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 33

Conread position: 271-522
Cow position: chrX:32943097-32942856 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 17, 160

Conread position: 272-512
Cow position: chrX:36848595-36848343 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 137

Conread position: 288-426
Cow position: chrX:4466966-4467107 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 288-522
Cow position: chrX:27668959-27668738 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 13, 137

Conread position: 297-533
Cow position: chrX:31373546-31373784 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 14

Conread position: 300-435
Cow position: chrX:29467765-29467630 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 124

Conread position: 311-423
Cow position: chrX:20340619-20340506 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 311-458
Cow position: chrX:44926480-44926628 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 12, 113

Conread position: 311-531
Cow position: chrX:34508568-34508794 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 110

Conread position: 311-533
Cow position: chrX:46079109-46079323 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 92

Conread position: 311-536
Cow position: chrX:2935981-2936192 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 113

Conread position: 312-429
Cow position: chrX:32866900-32867017 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 111

Conread position: 312-531
Cow position: chrX:38301834-38302047 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 111

Conread position: 313-429
Cow position: chrX:23359085-23358972 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 313-433
Cow position: chrX:20583692-20583812 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 111

Conread position: 316-427
Cow position: chrX:29501855-29501743 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 317-533
Cow position: chrX:40046545-40046333 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 189, 32

Conread position: 321-528
Cow position: chrX:6850244-6850456 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 188

Conread position: 322-522
Cow position: chrX:34991399-34991585 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 27, 102

Conread position: 336-522
Cow position: chrX:31983536-31983354 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 87

Conread position: 344-522
Cow position: chrX:6267719-6267894 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 50

Conread position: 346-531
Cow position: chrX:23182923-23182734 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 359-522
Cow position: chrX:13785149-13784988 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 63

Conread position: 359-532
Cow position: chrX:42164467-42164646 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 408-532
Cow position: chrX:42147979-42148100 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.