Cow genome map

Conread name: Ova1-OVRM10066H07

Conread position: 1-362
Cow position: chr14:25877173-25877534 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 226
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 52

Conread position: 1-364
Cow position: chr14:25859366-25859729 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 219
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 214, 219

Conread position: 1-365
Cow position: chr14:3155912-3156276 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 219
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-365
Cow position: chr14:3156080-3156444 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 229
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-365
Cow position: chr14:25859618-25859982 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 231
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 43, 32

Conread position: 1-366
Cow position: chr14:25795168-25794803 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 219
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 213, 220

Conread position: 1-369
Cow position: chr14:3127924-3127556 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1-372
Cow position: chr14:25896052-25896421 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 237
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 342, 0

Conread position: 1-374
Cow position: chr14:25895968-25896341 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 129, 137

Conread position: 1-377
Cow position: chr14:3127672-3127296 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 232
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-380
Cow position: chr14:25895296-25895675 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 249
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 297, 303

Conread position: 1-381
Cow position: chr14:25860290-25860670 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 244
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 35

Conread position: 1-381
Cow position: chr14:25895800-25896180 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1-392
Cow position: chr14:25860038-25860429 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 299, 304

Conread position: 1-392
Cow position: chr14:25860374-25860765 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 249
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 348, 343

Conread position: 1-395
Cow position: chr14:25860206-25860600 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 54

Conread position: 1-395
Cow position: chr14:25877257-25877651 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 54

Conread position: 1-395
Cow position: chr14:25895884-25896278 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 241
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 52

Conread position: 1-396
Cow position: chr14:25836061-25836456 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 258
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 47

Conread position: 1-396
Cow position: chr14:25836229-25836624 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 249
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 47

Conread position: 1-396
Cow position: chr14:25836397-25836792 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 251
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 303, 298

Conread position: 1-396
Cow position: chr14:25836565-25836960 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 246
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 303, 296

Conread position: 1-396
Cow position: chr14:25836733-25837128 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 255
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 387, 367

Conread position: 1-396
Cow position: chr14:25877341-25877736 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 251
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 386, 380

Conread position: 1-396
Cow position: chr14:25877425-25877820 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 257
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 348, 343

Conread position: 1-396
Cow position: chr14:25910765-25911156 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 254
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 377, 23

Conread position: 2-363
Cow position: chr14:3100822-3100461 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 223
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 51

Conread position: 2-365
Cow position: chr14:447772-448135 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 220
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 51

Conread position: 2-367
Cow position: chr14:25836146-25836511 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 230
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-369
Cow position: chr14:3080747-3080380 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 35, 31

Conread position: 2-377
Cow position: chr14:3080075-3079700 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 2-395
Cow position: chr14:25836482-25836875 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 253
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 335, 339

Conread position: 3-392
Cow position: chr14:25876503-25876892 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 380

Conread position: 4-362
Cow position: chr14:680660-681018 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 225
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 4-362
Cow position: chr14:25895719-25896077 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 229
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 35, 27

Conread position: 4-363
Cow position: chr14:25895635-25895994 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 228
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 4-364
Cow position: chr14:433827-434187 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 38

Conread position: 4-364
Cow position: chr14:680240-680600 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 216
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-364
Cow position: chr14:25895047-25895407 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 229
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 212, 199

Conread position: 4-365
Cow position: chr14:3061220-3060859 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 219
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 279, 291

Conread position: 4-369
Cow position: chr14:3080241-3079876 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-369
Cow position: chr14:3127753-3127388 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 227
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 283, 272

Conread position: 4-369
Cow position: chr14:25895467-25895832 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 234
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 94, 87

Conread position: 4-371
Cow position: chr14:3061052-3060685 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 223
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 4-377
Cow position: chr14:680492-680865 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 234
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 4-380
Cow position: chr14:433995-434371 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 237
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 43, 30

Conread position: 4-380
Cow position: chr14:680744-681120 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 237
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 301, 293

Conread position: 4-381
Cow position: chr14:680576-680953 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-381
Cow position: chr14:25876336-25876713 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 4-382
Cow position: chr14:3061388-3061011 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 238
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 134

Conread position: 4-392
Cow position: chr14:25895383-25895771 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 242
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 41

Conread position: 4-396
Cow position: chr14:3128005-3127613 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 254
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 49

Conread position: 13-327
Cow position: chr14:3079980-3079666 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 196
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 250, 246

Conread position: 13-363
Cow position: chr14:3127828-3127478 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 224
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 195, 208

Conread position: 13-364
Cow position: chr14:680417-680768 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 220
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 292, 284

Conread position: 13-365
Cow position: chr14:447699-448051 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 216
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 13-376
Cow position: chr14:3061463-3061100 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 216
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-380
Cow position: chr14:447615-447982 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 235
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 33, 21

Conread position: 13-380
Cow position: chr14:3080400-3080033 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 230
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 13-396
Cow position: chr14:25794568-25794184 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 237
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 235, 0

Conread position: 18-366
Cow position: chr14:25835910-25836258 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 207
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 32-367
Cow position: chr14:25783305-25783640 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 202
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 180, 166

Conread position: 39-396
Cow position: chr14:25876286-25876644 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 218
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 22

Conread position: 42-356
Cow position: chr14:25783651-25783965 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 194
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 43-331
Cow position: chr14:3155549-3155837 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 181
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 46-363
Cow position: chr14:25894841-25895154 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 195
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 50-380
Cow position: chr14:3128043-3127713 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 213
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 67, 73

Conread position: 51-363
Cow position: chr14:25859332-25859644 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 51-392
Cow position: chr14:25876803-25877144 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 84, 67

Conread position: 51-396
Cow position: chr14:25860004-25860349 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 221
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 174, 179

Conread position: 51-396
Cow position: chr14:25876467-25876812 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 74, 83

Conread position: 51-396
Cow position: chr14:25877055-25877400 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 174, 179

Conread position: 52-326
Cow position: chr14:25860509-25860783 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 66

Conread position: 52-342
Cow position: chr14:25877560-25877850 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 189
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 85, 66

Conread position: 52-356
Cow position: chr14:25784333-25784637 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 52-362
Cow position: chr14:25783997-25784307 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 52-364
Cow position: chr14:25910896-25911208 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 52-365
Cow position: chr14:3061256-3060943 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 196
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 253, 244

Conread position: 52-365
Cow position: chr14:3080613-3080300 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 52-366
Cow position: chr14:3061508-3061194 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 6

Conread position: 52-366
Cow position: chr14:3128125-3127811 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 205
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 231, 256

Conread position: 52-367
Cow position: chr14:25876972-25877287 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 85, 76

Conread position: 52-368
Cow position: chr14:3080529-3080213 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 52-380
Cow position: chr14:3080445-3080117 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 321, 303

Conread position: 52-392
Cow position: chr14:25836868-25837208 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 224
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 52-392
Cow position: chr14:25859585-25859925 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 52-395
Cow position: chr14:3155309-3155649 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 51

Conread position: 53-353
Cow position: chr14:25795368-25795068 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 61

Conread position: 56-382
Cow position: chr14:25784169-25784495 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 59-326
Cow position: chr14:25836959-25837226 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 60-367
Cow position: chr14:3100680-3100373 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 198
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 140, 148

Conread position: 62-381
Cow position: chr14:25794939-25794620 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 198
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 296, 306

Conread position: 64-363
Cow position: chr14:447918-448217 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 64-364
Cow position: chr14:3061664-3061364 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 182
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 64-368
Cow position: chr14:25895023-25895327 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 146

Conread position: 64-380
Cow position: chr14:3080265-3079949 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 193
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 199, 195

Conread position: 66-369
Cow position: chr14:25894941-25895244 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 228, 212

Conread position: 69-385
Cow position: chr14:3061743-3061425 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 209
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 68, 61

Conread position: 73-369
Cow position: chr14:3155900-3156196 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 58, 65

Conread position: 87-369
Cow position: chr14:3080830-3080548 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 178
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 97-380
Cow position: chr14:433836-434119 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 125-366
Cow position: chr14:3128136-3127895 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 175, 180

Conread position: 136-369
Cow position: chr14:447570-447803 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.