Cow genome map
| Conread name: | Ova1-OVRM10066H07 |
| Conread position: | 1-323 |
| Cow position: | chr19:23650157-23650479 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 124, 137 |
| Conread position: | 1-365 |
| Cow position: | chr19:23614119-23614483 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 304, 282 |
| Conread position: | 1-368 |
| Cow position: | chr19:23596879-23597243 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 1-368 |
| Cow position: | chr19:23649317-23649684 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-374 |
| Cow position: | chr19:14940255-14940628 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 159 |
| Conread position: | 1-374 |
| Cow position: | chr19:23613783-23614156 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-380 |
| Cow position: | chr19:23650073-23650452 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-381 |
| Cow position: | chr19:23649569-23649949 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-395 |
| Cow position: | chr19:23613699-23614093 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 373, 368 |
| Conread position: | 1-396 |
| Cow position: | chr19:23614707-23615102 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 372, 366 |
| Conread position: | 1-396 |
| Cow position: | chr19:23649653-23650048 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 277 |
| Conread position: | 2-362 |
| Cow position: | chr19:20678303-20678663 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 2-364 |
| Cow position: | chr19:14940088-14940450 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-368 |
| Cow position: | chr19:23597213-23597579 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-369 |
| Cow position: | chr19:23649402-23649769 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 294 |
| Conread position: | 2-396 |
| Cow position: | chr19:14940424-14940818 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-396 |
| Cow position: | chr19:23649486-23649880 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-362 |
| Cow position: | chr19:14940509-14940868 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 331, 338 |
| Conread position: | 3-365 |
| Cow position: | chr19:14940005-14940367 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-396 |
| Cow position: | chr19:14960206-14959815 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 252 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 8-396 |
| Cow position: | chr19:14940178-14940566 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-365 |
| Cow position: | chr19:20635439-20635086 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 12-365 |
| Cow position: | chr19:23613962-23614315 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-382 |
| Cow position: | chr19:14948356-14947987 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 204, 214 |
| Conread position: | 37-395 |
| Cow position: | chr19:23597080-23597438 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-365 |
| Cow position: | chr19:14940381-14940703 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-350 |
| Cow position: | chr19:23614086-23614384 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 234, 225 |
| Conread position: | 52-366 |
| Cow position: | chr19:43570242-43569928 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 62 |
| Conread position: | 52-369 |
| Cow position: | chr19:23614422-23614739 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 244, 225 |
| Conread position: | 52-392 |
| Cow position: | chr19:23613414-23613754 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 52-396 |
| Cow position: | chr19:23614254-23614598 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 156, 147 |
| Conread position: | 56-367 |
| Cow position: | chr19:14940730-14941041 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 59-396 |
| Cow position: | chr19:14940649-14940986 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-380 |
| Cow position: | chr19:20677607-20677925 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 64-380 |
| Cow position: | chr19:14948470-14948157 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 65-370 |
| Cow position: | chr19:23649297-23649602 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-374 |
| Cow position: | chr19:14940012-14940292 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-396 |
| Cow position: | chr19:14939987-14940230 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 170-380 |
| Cow position: | chr19:14960375-14960165 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 175-396 |
| Cow position: | chr19:14960454-14960233 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 18 |
Show alignments to all cow chromosomes.