Cow genome map
| Conread name: | Ova1-OVRM10066H07 |
| Conread position: | 1-319 |
| Cow position: | chr22:12399075-12398757 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-334 |
| Cow position: | chr22:12499639-12499972 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 301, 292 |
| Conread position: | 1-342 |
| Cow position: | chr22:12431139-12430798 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 192, 202 |
| Conread position: | 1-366 |
| Cow position: | chr22:11640703-11641068 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-367 |
| Cow position: | chr22:12431979-12431613 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-367 |
| Cow position: | chr22:46654446-46654812 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-368 |
| Cow position: | chr22:46654278-46654645 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 146, 138 |
| Conread position: | 1-375 |
| Cow position: | chr22:46654110-46654484 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 146, 138 |
| Conread position: | 1-381 |
| Cow position: | chr22:12399243-12398863 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 245 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-390 |
| Cow position: | chr22:12476124-12475735 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 126, 117 |
| Conread position: | 1-395 |
| Cow position: | chr22:12385317-12384923 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 287, 279 |
| Conread position: | 1-396 |
| Cow position: | chr22:12399327-12398932 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-396 |
| Cow position: | chr22:12399909-12399520 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-396 |
| Cow position: | chr22:12431391-12430996 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 52, 48 |
| Conread position: | 1-396 |
| Cow position: | chr22:12475956-12475561 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-329 |
| Cow position: | chr22:12458090-12457763 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 2-359 |
| Cow position: | chr22:12431306-12430949 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 125, 115 |
| Conread position: | 2-364 |
| Cow position: | chr22:11701283-11701645 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 2-364 |
| Cow position: | chr22:12419013-12418651 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-365 |
| Cow position: | chr22:14429660-14430023 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 47, 51 |
| Conread position: | 2-366 |
| Cow position: | chr22:11640872-11641236 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-366 |
| Cow position: | chr22:12431642-12431278 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 173, 177 |
| Conread position: | 2-374 |
| Cow position: | chr22:12475703-12475331 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-374 |
| Cow position: | chr22:12499556-12499928 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-396 |
| Cow position: | chr22:12399829-12399436 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-364 |
| Cow position: | chr22:12458424-12458064 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-396 |
| Cow position: | chr22:12475861-12475477 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-396 |
| Cow position: | chr22:12499398-12499782 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-326 |
| Cow position: | chr22:12385221-12384908 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-357 |
| Cow position: | chr22:12458499-12458155 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-396 |
| Cow position: | chr22:12418918-12418535 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-396 |
| Cow position: | chr22:12431211-12430828 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 264, 276 |
| Conread position: | 13-396 |
| Cow position: | chr22:12458583-12458200 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 354 |
| Conread position: | 40-396 |
| Cow position: | chr22:12385616-12385258 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 63 |
| Conread position: | 42-362 |
| Cow position: | chr22:46654235-46654555 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 42-366 |
| Cow position: | chr22:46654067-46654391 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 168, 158 |
| Conread position: | 42-380 |
| Cow position: | chr22:46654403-46654741 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 43-357 |
| Cow position: | chr22:12399705-12399391 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-364 |
| Cow position: | chr22:14429869-14430190 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 99, 82 |
| Conread position: | 43-369 |
| Cow position: | chr22:12399453-12399127 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-374 |
| Cow position: | chr22:12458217-12457886 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 186, 155 |
| Conread position: | 52-362 |
| Cow position: | chr22:12499522-12499832 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-364 |
| Cow position: | chr22:11666595-11666907 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 57 |
| Conread position: | 52-364 |
| Cow position: | chr22:12418795-12418483 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 125, 105 |
| Conread position: | 52-364 |
| Cow position: | chr22:12431760-12431448 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-367 |
| Cow position: | chr22:12476157-12475842 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 68, 50 |
| Conread position: | 52-369 |
| Cow position: | chr22:11641006-11641323 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-369 |
| Cow position: | chr22:12399612-12399295 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 152, 139 |
| Conread position: | 52-372 |
| Cow position: | chr22:12476325-12476005 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-372 |
| Cow position: | chr22:12544477-12544796 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 52-375 |
| Cow position: | chr22:12399360-12399037 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-376 |
| Cow position: | chr22:12385688-12385363 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 52-380 |
| Cow position: | chr22:12498850-12499178 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-395 |
| Cow position: | chr22:12385436-12385091 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 52-395 |
| Cow position: | chr22:12499102-12499445 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-396 |
| Cow position: | chr22:12431424-12431080 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-396 |
| Cow position: | chr22:12458292-12457948 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 115 |
| Conread position: | 62-368 |
| Cow position: | chr22:46654003-46654309 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 142, 147 |
| Conread position: | 81-370 |
| Cow position: | chr22:12419018-12418729 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-392 |
| Cow position: | chr22:11640628-11640926 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 44 |
| Conread position: | 120-374 |
| Cow position: | chr22:12432448-12432194 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.