Cow genome map


           Conread name:
           Ova1-OVRM10066H07
        

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               301, 292
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               192, 202
               

               Conread position:
               1-366
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               146, 138
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               146, 138
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               245
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-390
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               126, 117
               

               Conread position:
               1-395
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               287, 279
               

               Conread position:
               1-396
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-396
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-396
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               52, 48
               

               Conread position:
               1-396
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-329
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               2-359
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               125, 115
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-365
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               47, 51
               

               Conread position:
               2-366
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-366
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               173, 177
               

               Conread position:
               2-374
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-374
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-396
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-364
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-396
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-396
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-326
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-357
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-396
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-396
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               264, 276
               

               Conread position:
               13-396
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               360, 354
               

               Conread position:
               40-396
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 63
               

               Conread position:
               42-362
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               42-366
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               168, 158
               

               Conread position:
               42-380
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               43-357
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               43-364
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               99, 82
               

               Conread position:
               43-369
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               43-374
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               186, 155
               

               Conread position:
               52-362
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-364
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               85, 57
               

               Conread position:
               52-364
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               125, 105
               

               Conread position:
               52-364
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-367
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 50
               

               Conread position:
               52-369
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-369
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               152, 139
               

               Conread position:
               52-372
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-372
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 50
               

               Conread position:
               52-375
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-376
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               52-380
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-395
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               52-395
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-396
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-396
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 115
               

               Conread position:
               62-368
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               142, 147
               

               Conread position:
               81-370
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-392
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               36, 44
               

               Conread position:
               120-374
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.