Cow genome map
| Conread name: | Ova1-OVRM10066H07 |
| Conread position: | 1-245 |
| Cow position: | chr6:49429248-49429492 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-342 |
| Cow position: | chr6:49396641-49396982 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 134, 109 |
| Conread position: | 1-365 |
| Cow position: | chr6:49428912-49429276 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 1-380 |
| Cow position: | chr6:49428660-49429039 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 304, 273 |
| Conread position: | 1-386 |
| Cow position: | chr6:49428492-49428876 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 255 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 1-395 |
| Cow position: | chr6:49396305-49396699 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-396 |
| Cow position: | chr6:49396557-49396952 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 100 |
| Conread position: | 1-396 |
| Cow position: | chr6:49428744-49429139 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 4-364 |
| Cow position: | chr6:49428579-49428939 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 4-380 |
| Cow position: | chr6:49428327-49428703 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 4-385 |
| Cow position: | chr6:49428411-49428791 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 4-392 |
| Cow position: | chr6:49428831-49429219 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 49 |
| Conread position: | 4-396 |
| Cow position: | chr6:49396392-49396784 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 43, 47 |
| Conread position: | 4-396 |
| Cow position: | chr6:49396476-49396868 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 384, 367 |
| Conread position: | 13-369 |
| Cow position: | chr6:49429176-49429530 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 318, 0 |
| Conread position: | 13-381 |
| Cow position: | chr6:49428252-49428620 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 43-395 |
| Cow position: | chr6:49396263-49396615 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 306, 301 |
| Conread position: | 51-391 |
| Cow position: | chr6:49362401-49362729 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 337, 229 |
| Conread position: | 51-396 |
| Cow position: | chr6:49396025-49396364 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 52-365 |
| Cow position: | chr6:49340971-49341284 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 159, 155 |
| Conread position: | 52-392 |
| Cow position: | chr6:49341055-49341395 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-396 |
| Cow position: | chr6:49340467-49340811 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 159, 155 |
| Conread position: | 52-396 |
| Cow position: | chr6:49340803-49341147 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-396 |
| Cow position: | chr6:49340887-49341231 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-396 |
| Cow position: | chr6:49396194-49396532 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 63-396 |
| Cow position: | chr6:49340394-49340727 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 299, 292 |
| Conread position: | 68-386 |
| Cow position: | chr6:49428222-49428540 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 230 |
Show alignments to all cow chromosomes.