Cow genome map
| Conread name: | Ova1-OVRM10066H07 |
| Conread position: | 1-337 |
| Cow position: | chr7:1014285-1014621 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 123, 135 |
| Conread position: | 1-363 |
| Cow position: | chr7:3180045-3180407 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-365 |
| Cow position: | chr7:1014783-1015147 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 117, 102 |
| Conread position: | 1-366 |
| Cow position: | chr7:42878592-42878226 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 320, 346 |
| Conread position: | 1-396 |
| Cow position: | chr7:3180465-3180859 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 62, 56 |
| Conread position: | 2-362 |
| Cow position: | chr7:1439904-1440263 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 200, 71 |
| Conread position: | 2-365 |
| Cow position: | chr7:8278029-8278392 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 2-374 |
| Cow position: | chr7:18390175-18390547 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 3-369 |
| Cow position: | chr7:18390344-18390710 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 4-385 |
| Cow position: | chr7:12293447-12293827 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 42, 58 |
| Conread position: | 12-368 |
| Cow position: | chr7:3180308-3180664 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 116, 97 |
| Conread position: | 12-374 |
| Cow position: | chr7:3179888-3180250 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 29, 22 |
| Conread position: | 12-380 |
| Cow position: | chr7:42879169-42878801 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 12-395 |
| Cow position: | chr7:18390017-18390400 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 109, 116 |
| Conread position: | 12-395 |
| Cow position: | chr7:42878833-42878450 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-396 |
| Cow position: | chr7:1014963-1015346 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-349 |
| Cow position: | chr7:1438374-1438693 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 40-368 |
| Cow position: | chr7:8277899-8278227 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 40-374 |
| Cow position: | chr7:42879309-42878975 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-396 |
| Cow position: | chr7:3180000-3180356 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 85, 98 |
| Conread position: | 42-385 |
| Cow position: | chr7:1439860-1440202 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 325, 115 |
| Conread position: | 42-395 |
| Cow position: | chr7:11601134-11600781 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 247, 235 |
| Conread position: | 43-362 |
| Cow position: | chr7:1014909-1015227 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 316, 0 |
| Conread position: | 52-395 |
| Cow position: | chr7:42878877-42878534 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 52-396 |
| Cow position: | chr7:42878625-42878281 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-396 |
| Cow position: | chr7:42879213-42878869 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-366 |
| Cow position: | chr7:1014668-1014980 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 76, 84 |
| Conread position: | 59-395 |
| Cow position: | chr7:3180439-3180775 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 64-365 |
| Cow position: | chr7:28846498-28846799 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 64, 46 |
| Conread position: | 64-369 |
| Cow position: | chr7:12293339-12293644 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-368 |
| Cow position: | chr7:11434496-11434276 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-381 |
| Cow position: | chr7:11601191-11600963 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 133, 125 |
| Conread position: | 160-396 |
| Cow position: | chr7:3179700-3179936 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 218, 208 |
Show alignments to all cow chromosomes.