Cow genome map
| Conread name: | Ova1-OVRM10069A04 |
| Conread position: | 81-285 |
| Cow position: | chr11:48660342-48660549 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 81-390 |
| Cow position: | chr11:76532396-76532708 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 167 |
| Conread position: | 87-270 |
| Cow position: | chr11:67966515-67966701 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 162 |
| Conread position: | 88-255 |
| Cow position: | chr11:64080278-64080449 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 162 |
| Conread position: | 88-267 |
| Cow position: | chr11:62236016-62235834 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 97, 47 |
| Conread position: | 88-390 |
| Cow position: | chr11:76534372-76534067 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 8, 186 |
| Conread position: | 96-267 |
| Cow position: | chr11:7435497-7435672 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 137 |
| Conread position: | 98-262 |
| Cow position: | chr11:70890518-70890351 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 100-282 |
| Cow position: | chr11:43253011-43252827 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 105-237 |
| Cow position: | chr11:51989016-51988882 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 119-260 |
| Cow position: | chr11:5608304-5608448 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 120-264 |
| Cow position: | chr11:67270100-67270249 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 124-390 |
| Cow position: | chr11:21512542-21512281 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 141-390 |
| Cow position: | chr11:16880978-16880731 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 57, 166 |
| Conread position: | 150-342 |
| Cow position: | chr11:12409724-12409529 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 97 |
| Conread position: | 242-363 |
| Cow position: | chr11:62579939-62580058 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 253-476 |
| Cow position: | chr11:48259068-48258850 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 256-489 |
| Cow position: | chr11:62582361-62582144 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 256-489 |
| Cow position: | chr11:71359442-71359209 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 256-576 |
| Cow position: | chr11:38210465-38210776 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 261-420 |
| Cow position: | chr11:65957382-65957221 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 262-581 |
| Cow position: | chr11:48257426-48257106 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 52 |
| Conread position: | 263-489 |
| Cow position: | chr11:32816072-32815845 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 270-489 |
| Cow position: | chr11:52074467-52074683 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 51, 185 |
| Conread position: | 273-493 |
| Cow position: | chr11:372029-372252 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 273-494 |
| Cow position: | chr11:40540232-40540456 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 111 |
| Conread position: | 275-503 |
| Cow position: | chr11:65879026-65879253 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 284-475 |
| Cow position: | chr11:8555693-8555881 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 305-600 |
| Cow position: | chr11:84807873-84807575 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 134, 74 |
| Conread position: | 336-490 |
| Cow position: | chr11:65995125-65994970 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 368-489 |
| Cow position: | chr11:62580230-62580351 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.