Cow genome map
| Conread name: | Ova1-OVRM10069A04 |
| Conread position: | 79-249 |
| Cow position: | chr13:51121794-51121976 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 79-317 |
| Cow position: | chr13:17774613-17774381 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 56, 151 |
| Conread position: | 84-390 |
| Cow position: | chr13:33471996-33471698 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 100, 54 |
| Conread position: | 87-282 |
| Cow position: | chr13:1722647-1722444 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 96, 51 |
| Conread position: | 88-261 |
| Cow position: | chr13:52399572-52399737 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 97, 108 |
| Conread position: | 88-319 |
| Cow position: | chr13:5004291-5004056 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 8, 221 |
| Conread position: | 88-485 |
| Cow position: | chr13:10042236-10042635 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 89-256 |
| Cow position: | chr13:17026804-17026634 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 93, 132 |
| Conread position: | 94-390 |
| Cow position: | chr13:24012485-24012780 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 44, 190 |
| Conread position: | 95-390 |
| Cow position: | chr13:30154480-30154776 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 216 |
| Conread position: | 95-390 |
| Cow position: | chr13:34743679-34743979 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 96-261 |
| Cow position: | chr13:59065594-59065424 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 99-276 |
| Cow position: | chr13:52317761-52317580 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 100-267 |
| Cow position: | chr13:2215376-2215209 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 100-267 |
| Cow position: | chr13:2360898-2360727 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 117-390 |
| Cow position: | chr13:8816140-8815872 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 74, 20 |
| Conread position: | 119-390 |
| Cow position: | chr13:28067169-28066898 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 123-261 |
| Cow position: | chr13:27013125-27013267 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 124-260 |
| Cow position: | chr13:25356010-25356150 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 111 |
| Conread position: | 144-265 |
| Cow position: | chr13:19858984-19859108 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 180-480 |
| Cow position: | chr13:22472066-22472359 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 141 |
| Conread position: | 187-594 |
| Cow position: | chr13:23498395-23498801 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 242-485 |
| Cow position: | chr13:51122218-51122449 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 246-495 |
| Cow position: | chr13:16035314-16035557 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 263-559 |
| Cow position: | chr13:498774-499070 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 273-427 |
| Cow position: | chr13:50639723-50639572 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 273-576 |
| Cow position: | chr13:9893688-9893387 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 274-393 |
| Cow position: | chr13:10386741-10386622 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-477 |
| Cow position: | chr13:32758358-32758561 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 139 |
| Conread position: | 279-488 |
| Cow position: | chr13:27859755-27859961 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 58, 119 |
| Conread position: | 279-589 |
| Cow position: | chr13:21955703-21955997 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 207, 95 |
| Conread position: | 280-565 |
| Cow position: | chr13:2555225-2555517 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 232 |
| Conread position: | 280-576 |
| Cow position: | chr13:10418459-10418164 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 210 |
| Conread position: | 284-429 |
| Cow position: | chr13:9864521-9864666 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 111, 61 |
| Conread position: | 293-489 |
| Cow position: | chr13:39509241-39509432 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 316-576 |
| Cow position: | chr13:16541701-16541452 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
Show alignments to all cow chromosomes.