Cow genome map
| Conread name: | Ova1-OVRM10069A04 |
| Conread position: | 69-267 |
| Cow position: | chr18:11180520-11180310 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 77-390 |
| Cow position: | chr18:29222755-29222443 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 87-265 |
| Cow position: | chr18:16063128-16062946 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 87-598 |
| Cow position: | chr18:11417698-11417205 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 59 |
| Conread position: | 88-273 |
| Cow position: | chr18:4490783-4490963 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 97, 56 |
| Conread position: | 88-293 |
| Cow position: | chr18:39132943-39133152 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 90, 194 |
| Conread position: | 88-318 |
| Cow position: | chr18:1169260-1169493 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 221 |
| Conread position: | 88-529 |
| Cow position: | chr18:39038396-39037949 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 88-532 |
| Cow position: | chr18:22058427-22058870 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 136 |
| Conread position: | 89-242 |
| Cow position: | chr18:50053284-50053443 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 89-317 |
| Cow position: | chr18:10403658-10403891 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 10, 222 |
| Conread position: | 91-598 |
| Cow position: | chr18:30509769-30510253 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 219 |
| Conread position: | 94-262 |
| Cow position: | chr18:54294174-54294341 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 95-390 |
| Cow position: | chr18:55059923-55060208 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 54, 103 |
| Conread position: | 96-270 |
| Cow position: | chr18:365853-366032 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 53, 173 |
| Conread position: | 96-272 |
| Cow position: | chr18:18425422-18425604 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 98-259 |
| Cow position: | chr18:13716827-13716996 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 101-248 |
| Cow position: | chr18:52737946-52737794 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 113-364 |
| Cow position: | chr18:43654775-43654527 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 124-390 |
| Cow position: | chr18:9922078-9921808 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 144-489 |
| Cow position: | chr18:25132394-25132041 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 239-603 |
| Cow position: | chr18:3327155-3326797 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 105 |
| Conread position: | 251-489 |
| Cow position: | chr18:11498059-11497835 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 262-489 |
| Cow position: | chr18:35039879-35039654 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 156 |
| Conread position: | 262-576 |
| Cow position: | chr18:30346588-30346899 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 159 |
| Conread position: | 274-589 |
| Cow position: | chr18:45616185-45616499 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 116 |
| Conread position: | 279-446 |
| Cow position: | chr18:4468425-4468589 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 290-605 |
| Cow position: | chr18:39133258-39133562 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 50 |
| Conread position: | 304-484 |
| Cow position: | chr18:39044181-39044000 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 400-594 |
| Cow position: | chr18:48387890-48388081 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 182, 69 |
| Conread position: | 431-594 |
| Cow position: | chr18:50017635-50017482 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 147, 58 |
Show alignments to all cow chromosomes.