Cow genome map
| Conread name: | Ova1-OVRM10069A04 |
| Conread position: | 66-257 |
| Cow position: | chr2:44078416-44078612 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 81-257 |
| Cow position: | chr2:36660967-36661148 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 87-257 |
| Cow position: | chr2:2370370-2370547 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 87-267 |
| Cow position: | chr2:64793329-64793141 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 88-233 |
| Cow position: | chr2:9936279-9936425 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 69 |
| Conread position: | 88-265 |
| Cow position: | chr2:46263152-46262973 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 82, 117 |
| Conread position: | 88-267 |
| Cow position: | chr2:16364564-16364379 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 88-267 |
| Cow position: | chr2:41124458-41124642 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 88-272 |
| Cow position: | chr2:85012126-85011941 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 88-303 |
| Cow position: | chr2:22360169-22359947 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 88-373 |
| Cow position: | chr2:46296604-46296891 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 15 |
| Conread position: | 88-387 |
| Cow position: | chr2:47839441-47839139 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 224 |
| Conread position: | 88-390 |
| Cow position: | chr2:6301411-6301113 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 29 |
| Conread position: | 88-390 |
| Cow position: | chr2:7445157-7444855 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 8, 201 |
| Conread position: | 88-390 |
| Cow position: | chr2:37731175-37731477 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 69 |
| Conread position: | 88-390 |
| Cow position: | chr2:53319158-53319465 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 147 |
| Conread position: | 88-414 |
| Cow position: | chr2:46275983-46275655 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 92-489 |
| Cow position: | chr2:40049470-40049868 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 289 |
| Conread position: | 95-304 |
| Cow position: | chr2:18011644-18011430 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 55, 181 |
| Conread position: | 95-390 |
| Cow position: | chr2:6731253-6731547 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 97-267 |
| Cow position: | chr2:69641241-69641415 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 100-266 |
| Cow position: | chr2:82188072-82187903 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 100-390 |
| Cow position: | chr2:21037522-21037213 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 228 |
| Conread position: | 101-524 |
| Cow position: | chr2:41329225-41328799 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 39 |
| Conread position: | 103-390 |
| Cow position: | chr2:50541918-50542199 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 80, 44 |
| Conread position: | 105-260 |
| Cow position: | chr2:39513315-39513154 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 121-274 |
| Cow position: | chr2:41579926-41580081 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 138-267 |
| Cow position: | chr2:69760717-69760848 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 141-318 |
| Cow position: | chr2:33112401-33112224 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 147-318 |
| Cow position: | chr2:21039204-21039030 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 162 |
| Conread position: | 186-385 |
| Cow position: | chr2:4966527-4966330 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 121 |
| Conread position: | 207-390 |
| Cow position: | chr2:40737626-40737804 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 246-489 |
| Cow position: | chr2:55872316-55872076 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 246-576 |
| Cow position: | chr2:42231563-42231889 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 25 |
| Conread position: | 249-489 |
| Cow position: | chr2:46220965-46220728 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 263-489 |
| Cow position: | chr2:42317990-42318222 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 66, 133 |
| Conread position: | 273-490 |
| Cow position: | chr2:67247885-67248100 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 104 |
| Conread position: | 273-575 |
| Cow position: | chr2:39665484-39665191 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 273-576 |
| Cow position: | chr2:46603558-46603256 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 144 |
| Conread position: | 274-500 |
| Cow position: | chr2:6724441-6724217 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 217, 97 |
| Conread position: | 277-594 |
| Cow position: | chr2:35860434-35860131 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 301, 96 |
| Conread position: | 279-472 |
| Cow position: | chr2:82152875-82153068 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-484 |
| Cow position: | chr2:41128501-41128705 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 279-489 |
| Cow position: | chr2:42655717-42655499 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 117, 145 |
| Conread position: | 279-594 |
| Cow position: | chr2:72618614-72618301 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 34 |
| Conread position: | 280-602 |
| Cow position: | chr2:68605621-68605942 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 169 |
| Conread position: | 297-449 |
| Cow position: | chr2:6533238-6533390 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-488 |
| Cow position: | chr2:19245817-19245996 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 313-598 |
| Cow position: | chr2:7379655-7379961 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 103 |
| Conread position: | 357-490 |
| Cow position: | chr2:45669662-45669529 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-598 |
| Cow position: | chr2:54799612-54799384 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 91, 119 |
| Conread position: | 385-594 |
| Cow position: | chr2:41580136-41580360 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 397-576 |
| Cow position: | chr2:18874039-18874214 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.