Cow genome map
| Conread name: | Ova1-OVRM10069A04 |
| Conread position: | 61-390 |
| Cow position: | chr3:17658021-17658347 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 77, 81 |
| Conread position: | 73-494 |
| Cow position: | chr3:29145149-29144724 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 346 |
| Conread position: | 80-247 |
| Cow position: | chr3:24920788-24920617 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 87-390 |
| Cow position: | chr3:9287518-9287225 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 87-600 |
| Cow position: | chr3:60026202-60026697 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 63 |
| Conread position: | 88-248 |
| Cow position: | chr3:61962522-61962682 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 91, 130 |
| Conread position: | 88-267 |
| Cow position: | chr3:2810489-2810671 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 90, 71 |
| Conread position: | 88-267 |
| Cow position: | chr3:39204207-39204383 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 118, 47 |
| Conread position: | 88-276 |
| Cow position: | chr3:83964660-83964849 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 121 |
| Conread position: | 88-325 |
| Cow position: | chr3:29084045-29084283 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 95, 27 |
| Conread position: | 96-267 |
| Cow position: | chr3:28931004-28930836 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 86, 99 |
| Conread position: | 100-265 |
| Cow position: | chr3:79197494-79197668 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 108-390 |
| Cow position: | chr3:9005518-9005238 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 157 |
| Conread position: | 116-265 |
| Cow position: | chr3:54074078-54074232 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 116-267 |
| Cow position: | chr3:34233097-34233246 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 67, 23 |
| Conread position: | 118-384 |
| Cow position: | chr3:58244534-58244802 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 118 |
| Conread position: | 130-410 |
| Cow position: | chr3:60008951-60009227 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 126 |
| Conread position: | 135-582 |
| Cow position: | chr3:31816062-31815629 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 218-598 |
| Cow position: | chr3:83489224-83488847 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 11 |
| Conread position: | 239-507 |
| Cow position: | chr3:81267153-81267421 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 110 |
| Conread position: | 246-489 |
| Cow position: | chr3:66133512-66133266 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 15 |
| Conread position: | 256-489 |
| Cow position: | chr3:23086573-23086804 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 165, 15 |
| Conread position: | 256-489 |
| Cow position: | chr3:59560109-59559879 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 266-598 |
| Cow position: | chr3:39963735-39964070 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 221, 23 |
| Conread position: | 272-530 |
| Cow position: | chr3:71209494-71209234 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 164 |
| Conread position: | 272-589 |
| Cow position: | chr3:60018911-60018586 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 226 |
| Conread position: | 273-415 |
| Cow position: | chr3:39155301-39155443 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-595 |
| Cow position: | chr3:83963210-83962898 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 43 |
| Conread position: | 275-558 |
| Cow position: | chr3:12130113-12129833 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 285-410 |
| Cow position: | chr3:74540200-74540324 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 305-576 |
| Cow position: | chr3:70918231-70918489 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 336-488 |
| Cow position: | chr3:83964854-83965003 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 393-591 |
| Cow position: | chr3:74540735-74540931 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 174, 7 |
| Conread position: | 427-599 |
| Cow position: | chr3:60009366-60009541 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 90, 62 |
Show alignments to all cow chromosomes.