Cow genome map
| Conread name: | Ova1-OVRM10069A04 |
| Conread position: | 88-367 |
| Cow position: | chr9:2376875-2377150 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 50, 103 |
| Conread position: | 90-390 |
| Cow position: | chr9:22400980-22400661 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 95-385 |
| Cow position: | chr9:23881588-23881868 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 83 |
| Conread position: | 100-260 |
| Cow position: | chr9:51125316-51125151 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 72 |
| Conread position: | 101-390 |
| Cow position: | chr9:30657679-30657952 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 82, 51 |
| Conread position: | 103-250 |
| Cow position: | chr9:55158684-55158536 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 92 |
| Conread position: | 119-357 |
| Cow position: | chr9:9891833-9892062 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 162-384 |
| Cow position: | chr9:24593417-24593631 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 184-490 |
| Cow position: | chr9:8874468-8874764 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 187-494 |
| Cow position: | chr9:3704503-3704807 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 232-489 |
| Cow position: | chr9:1925865-1926118 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 263-489 |
| Cow position: | chr9:3879704-3879930 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 273-489 |
| Cow position: | chr9:54499408-54499195 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 273-598 |
| Cow position: | chr9:53498454-53498147 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 100 |
| Conread position: | 275-418 |
| Cow position: | chr9:56594573-56594431 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 275-489 |
| Cow position: | chr9:34887467-34887252 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 276-490 |
| Cow position: | chr9:8936486-8936699 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 276-494 |
| Cow position: | chr9:7310958-7311176 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 84, 39 |
| Conread position: | 279-474 |
| Cow position: | chr9:7872235-7872430 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 83, 187 |
| Conread position: | 279-489 |
| Cow position: | chr9:1836247-1836456 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 300-576 |
| Cow position: | chr9:7153474-7153195 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 122, 207 |
| Conread position: | 346-574 |
| Cow position: | chr9:36412864-36413103 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 427-596 |
| Cow position: | chr9:6364764-6364931 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 147, 60 |
Show alignments to all cow chromosomes.