Cow genome map

Conread name: Ova1-OVRM10074B08

Conread position: 1-696
Cow position: chr1:69767948-69768662 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 217

Conread position: 1-698
Cow position: chr1:22619286-22618589 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 51

Conread position: 1-700
Cow position: chr1:72082144-72082842 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 53

Conread position: 1-704
Cow position: chr1:80357806-80357069 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 480
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 37, 212

Conread position: 1-704
Cow position: chr1:81288503-81289226 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 208

Conread position: 1-704
Cow position: chr1:82654029-82654732 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 466
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 37, 89

Conread position: 1-718
Cow position: chr1:17011367-17010636 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 205

Conread position: 1-718
Cow position: chr1:33713439-33714188 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 205

Conread position: 1-718
Cow position: chr1:33897628-33898362 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 208

Conread position: 1-718
Cow position: chr1:52357879-52357152 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 46

Conread position: 1-718
Cow position: chr1:55275662-55274939 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 207

Conread position: 1-718
Cow position: chr1:67002526-67003260 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 205

Conread position: 1-718
Cow position: chr1:67833764-67833028 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 206

Conread position: 2-699
Cow position: chr1:91597339-91596631 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 252

Conread position: 3-717
Cow position: chr1:46837003-46837714 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 460
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 198

Conread position: 3-718
Cow position: chr1:76620101-76619373 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 198

Conread position: 3-718
Cow position: chr1:102433659-102432928 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 42

Conread position: 7-487
Cow position: chr1:30223066-30223527 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 321
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 14

Conread position: 10-718
Cow position: chr1:28874455-28875174 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 35

Conread position: 11-264
Cow position: chr1:31121513-31121252 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 231

Conread position: 11-596
Cow position: chr1:3384574-3383964 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 391
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 127

Conread position: 11-696
Cow position: chr1:67909931-67910633 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 444
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 186

Conread position: 11-704
Cow position: chr1:62804793-62804089 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 194

Conread position: 11-718
Cow position: chr1:42737821-42738532 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 11-718
Cow position: chr1:56192784-56192053 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 479
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 31, 196

Conread position: 11-718
Cow position: chr1:76750587-76749870 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 39

Conread position: 11-718
Cow position: chr1:94661059-94661777 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 38

Conread position: 11-719
Cow position: chr1:93855897-93856618 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 193

Conread position: 23-623
Cow position: chr1:33350979-33351567 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 391
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 35

Conread position: 23-681
Cow position: chr1:24652660-24653337 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 152

Conread position: 23-696
Cow position: chr1:5503369-5504049 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 23-718
Cow position: chr1:12060805-12060104 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 23-718
Cow position: chr1:74285276-74284576 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 23-718
Cow position: chr1:79455552-79454852 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 24-602
Cow position: chr1:71740743-71740169 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 9

Conread position: 24-715
Cow position: chr1:49972772-49972068 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 13

Conread position: 24-718
Cow position: chr1:30533618-30532916 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 21

Conread position: 24-718
Cow position: chr1:31364701-31364000 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 174

Conread position: 24-718
Cow position: chr1:63604374-63603666 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 13

Conread position: 24-720
Cow position: chr1:82922757-82922057 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 60

Conread position: 25-702
Cow position: chr1:86546736-86546050 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 25-704
Cow position: chr1:21088833-21089523 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 450
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 59, 18

Conread position: 25-718
Cow position: chr1:58177725-58177055 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 451
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 18

Conread position: 26-621
Cow position: chr1:20830297-20830892 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 26-700
Cow position: chr1:82565515-82566195 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 26-715
Cow position: chr1:29363697-29364398 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 21

Conread position: 26-718
Cow position: chr1:40056506-40057211 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 30-602
Cow position: chr1:26584506-26585075 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 377
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 19

Conread position: 30-715
Cow position: chr1:9259891-9260587 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 454
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 55, 17

Conread position: 30-715
Cow position: chr1:40683335-40682642 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 19

Conread position: 30-718
Cow position: chr1:10723988-10724684 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 30-718
Cow position: chr1:29035709-29036404 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 30-718
Cow position: chr1:91900432-91901128 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 17

Conread position: 33-718
Cow position: chr1:90607467-90606759 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 41-654
Cow position: chr1:91529238-91528628 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 399
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 78, 95

Conread position: 43-353
Cow position: chr1:29226303-29226598 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 78

Conread position: 43-696
Cow position: chr1:71561327-71560663 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 158

Conread position: 43-704
Cow position: chr1:34694100-34694780 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 447
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 5, 164

Conread position: 43-718
Cow position: chr1:13581572-13580893 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 423
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 99

Conread position: 43-718
Cow position: chr1:59207661-59206974 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 158

Conread position: 53-722
Cow position: chr1:53559950-53559278 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 431
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 231

Conread position: 93-696
Cow position: chr1:22725026-22724430 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 396
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 40

Conread position: 110-717
Cow position: chr1:18964877-18964262 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 24

Conread position: 113-718
Cow position: chr1:25053788-25054382 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 391
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 93, 45

Conread position: 113-718
Cow position: chr1:99914933-99915537 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 411
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 16, 84

Conread position: 142-621
Cow position: chr1:27112909-27112439 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 321
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 53

Conread position: 142-696
Cow position: chr1:72112530-72113090 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 374
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 16

Conread position: 144-602
Cow position: chr1:85824012-85824462 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 324
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 53, 48

Conread position: 145-718
Cow position: chr1:81777972-81778553 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 387
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 58, 50

Conread position: 202-666
Cow position: chr1:102014659-102015121 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 306
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 40

Conread position: 255-602
Cow position: chr1:30520413-30520765 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 112

Conread position: 255-696
Cow position: chr1:6769130-6769584 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 297
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 101

Conread position: 255-705
Cow position: chr1:39107203-39107670 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 303
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 66

Conread position: 256-715
Cow position: chr1:58338465-58338941 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 316
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 33, 67

Conread position: 256-718
Cow position: chr1:26813447-26812968 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 324
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 33, 41

Conread position: 256-718
Cow position: chr1:57569456-57569932 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 314
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 34, 48

Conread position: 256-718
Cow position: chr1:82911204-82910724 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 324
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 28, 114

Conread position: 257-718
Cow position: chr1:72985079-72985555 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 320
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 17

Conread position: 260-718
Cow position: chr1:38476937-38477409 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 320
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 29, 44

Conread position: 297-720
Cow position: chr1:86594641-86594201 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 280
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 7, 78

Conread position: 317-601
Cow position: chr1:76558610-76558890 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 149, 39

Conread position: 328-718
Cow position: chr1:79112147-79112561 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 267
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 126, 19

Conread position: 362-717
Cow position: chr1:68336274-68335917 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 15

Conread position: 362-721
Cow position: chr1:29039973-29040350 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 248
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 103, 57

Conread position: 364-704
Cow position: chr1:89494498-89494133 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 93, 12

Conread position: 365-718
Cow position: chr1:30716357-30716730 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 99, 11

Conread position: 365-718
Cow position: chr1:56165257-56165627 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 11

Conread position: 365-718
Cow position: chr1:100594493-100594122 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 106, 308

Conread position: 376-602
Cow position: chr1:5355193-5354955 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 116

Conread position: 377-722
Cow position: chr1:42419257-42419617 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 80

Conread position: 378-622
Cow position: chr1:19633453-19633705 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 101, 54

Conread position: 380-702
Cow position: chr1:53395266-53395606 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 18

Conread position: 380-718
Cow position: chr1:30282094-30281735 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 84, 346

Conread position: 382-702
Cow position: chr1:39539245-39538912 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 220
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 82, 31

Conread position: 393-721
Cow position: chr1:50591514-50591850 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 102

Conread position: 412-670
Cow position: chr1:34620606-34620863 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 27

Conread position: 424-705
Cow position: chr1:78361685-78361985 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 93

Conread position: 424-718
Cow position: chr1:8555472-8555785 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 185
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 111, 65

Conread position: 430-718
Cow position: chr1:90972739-90973048 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 62

Conread position: 434-718
Cow position: chr1:89187926-89187623 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 57

Conread position: 442-715
Cow position: chr1:9378730-9378440 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 50

Conread position: 453-718
Cow position: chr1:15438108-15437822 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 39

Conread position: 470-721
Cow position: chr1:49322569-49322301 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 201

Conread position: 479-718
Cow position: chr1:77923592-77923848 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 11

Conread position: 486-712
Cow position: chr1:99018195-99017958 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 231

Show alignments to all cow chromosomes.