Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-301 |
| Cow position: | chr10:35225056-35224762 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 125 |
| Conread position: | 1-696 |
| Cow position: | chr10:46196461-46197144 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 450 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 139, 46 |
| Conread position: | 1-704 |
| Cow position: | chr10:7897092-7896367 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 218 |
| Conread position: | 1-718 |
| Cow position: | chr10:21739357-21738627 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 200 |
| Conread position: | 1-718 |
| Cow position: | chr10:33870675-33871414 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 1-718 |
| Cow position: | chr10:41568491-41569229 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 1-718 |
| Cow position: | chr10:41878313-41879050 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 209 |
| Conread position: | 2-602 |
| Cow position: | chr10:29101323-29100722 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 397 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 83, 23 |
| Conread position: | 2-602 |
| Cow position: | chr10:29722655-29722056 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 396 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 207 |
| Conread position: | 2-696 |
| Cow position: | chr10:17197003-17196298 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 452 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 2-720 |
| Cow position: | chr10:24784716-24784013 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 34 |
| Conread position: | 11-714 |
| Cow position: | chr10:1378900-1379619 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 194 |
| Conread position: | 15-718 |
| Cow position: | chr10:55094680-55095392 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 23-714 |
| Cow position: | chr10:38343934-38343253 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-715 |
| Cow position: | chr10:41634828-41635509 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 455 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 23-718 |
| Cow position: | chr10:21488381-21489072 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr10:39039871-39039189 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 22 |
| Conread position: | 23-718 |
| Cow position: | chr10:39439575-39440283 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 469 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr10:57988571-57987883 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 25-704 |
| Cow position: | chr10:48397682-48397004 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 448 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 26-701 |
| Cow position: | chr10:57555911-57555227 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr10:28255992-28255281 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 30-718 |
| Cow position: | chr10:39814970-39814273 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 41-540 |
| Cow position: | chr10:10242379-10242861 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 322 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 146, 72 |
| Conread position: | 43-598 |
| Cow position: | chr10:22677396-22677916 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 366 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 43-718 |
| Cow position: | chr10:30684053-30683361 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 160 |
| Conread position: | 48-720 |
| Cow position: | chr10:22909018-22908340 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 450 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 48, 131 |
| Conread position: | 49-718 |
| Cow position: | chr10:29845206-29844534 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 53-715 |
| Cow position: | chr10:10583572-10584261 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 58-691 |
| Cow position: | chr10:38450997-38451634 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 432 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 145, 98 |
| Conread position: | 59-718 |
| Cow position: | chr10:38544435-38543788 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 428 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 110-704 |
| Cow position: | chr10:41158927-41159528 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 24 |
| Conread position: | 113-704 |
| Cow position: | chr10:32702272-32702871 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 82 |
| Conread position: | 115-694 |
| Cow position: | chr10:31525252-31525831 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 383 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 142-718 |
| Cow position: | chr10:19143071-19142489 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 160-718 |
| Cow position: | chr10:22343040-22343591 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 32 |
| Conread position: | 183-621 |
| Cow position: | chr10:22583475-22583028 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 230-722 |
| Cow position: | chr10:32016477-32016977 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 318 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 242-722 |
| Cow position: | chr10:6535352-6535837 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 325 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 256-718 |
| Cow position: | chr10:6556180-6556660 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 323 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 105 |
| Conread position: | 256-718 |
| Cow position: | chr10:23409603-23409121 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 326 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 256-718 |
| Cow position: | chr10:39209399-39209877 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 116 |
| Conread position: | 264-702 |
| Cow position: | chr10:50313298-50313741 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 306 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 336-718 |
| Cow position: | chr10:38841891-38842286 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 139, 5 |
| Conread position: | 355-704 |
| Cow position: | chr10:24295540-24295171 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 110, 66 |
| Conread position: | 373-602 |
| Cow position: | chr10:11822643-11822881 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 373-704 |
| Cow position: | chr10:28032166-28031812 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 102, 119 |
| Conread position: | 373-709 |
| Cow position: | chr10:57525573-57525225 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 91, 65 |
| Conread position: | 375-696 |
| Cow position: | chr10:54127316-54127656 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 108, 57 |
| Conread position: | 376-718 |
| Cow position: | chr10:34623776-34623416 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 348 |
| Conread position: | 377-718 |
| Cow position: | chr10:8340726-8341078 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 378-718 |
| Cow position: | chr10:48375686-48375325 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 86, 114 |
| Conread position: | 379-680 |
| Cow position: | chr10:31045764-31045443 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 61 |
| Conread position: | 380-718 |
| Cow position: | chr10:22250047-22249688 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 84, 346 |
| Conread position: | 381-718 |
| Cow position: | chr10:20382186-20381830 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 384-720 |
| Cow position: | chr10:24976066-24975716 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 46 |
| Conread position: | 385-704 |
| Cow position: | chr10:48652060-48652387 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 150, 72 |
| Conread position: | 401-718 |
| Cow position: | chr10:15488327-15488666 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 413-718 |
| Cow position: | chr10:36513069-36513397 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 316 |
| Conread position: | 413-722 |
| Cow position: | chr10:28710075-28710393 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 417-704 |
| Cow position: | chr10:37127984-37127681 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 111 |
| Conread position: | 434-700 |
| Cow position: | chr10:2119209-2118922 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 434-718 |
| Cow position: | chr10:7280212-7279912 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 288 |
Show alignments to all cow chromosomes.