Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-312 |
| Cow position: | chr13:19123915-19123620 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 63, 46 |
| Conread position: | 1-621 |
| Cow position: | chr13:48358739-48359343 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 130 |
| Conread position: | 1-621 |
| Cow position: | chr13:60648705-60648072 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 413 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 37, 205 |
| Conread position: | 1-718 |
| Cow position: | chr13:6667036-6666304 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 134 |
| Conread position: | 1-718 |
| Cow position: | chr13:16253420-16252684 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 259 |
| Conread position: | 1-718 |
| Cow position: | chr13:31508007-31508740 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 485 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 37, 127 |
| Conread position: | 1-718 |
| Cow position: | chr13:33524854-33524124 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 2-713 |
| Cow position: | chr13:11247057-11246325 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 5-718 |
| Cow position: | chr13:34041222-34040510 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 15-602 |
| Cow position: | chr13:43981968-43981387 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 393 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 16-700 |
| Cow position: | chr13:26590187-26589522 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 439 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 52, 84 |
| Conread position: | 21-722 |
| Cow position: | chr13:15450014-15449334 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 451 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 23-718 |
| Cow position: | chr13:4942515-4943220 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 23-718 |
| Cow position: | chr13:34343036-34343743 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr13:35758416-35759113 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 22 |
| Conread position: | 25-553 |
| Cow position: | chr13:37835187-37834671 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 348 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 26-718 |
| Cow position: | chr13:49974797-49975511 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 29-603 |
| Cow position: | chr13:31611175-31610606 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 135 |
| Conread position: | 29-721 |
| Cow position: | chr13:34096827-34096120 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 94 |
| Conread position: | 30-696 |
| Cow position: | chr13:13326064-13326734 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 30-704 |
| Cow position: | chr13:5500863-5500176 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-718 |
| Cow position: | chr13:21839058-21838378 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 17 |
| Conread position: | 31-602 |
| Cow position: | chr13:32984208-32983634 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 38-718 |
| Cow position: | chr13:30304347-30305031 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 446 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 41-648 |
| Cow position: | chr13:46527594-46528194 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 160 |
| Conread position: | 43-715 |
| Cow position: | chr13:32923986-32923303 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 155 |
| Conread position: | 43-717 |
| Cow position: | chr13:11739068-11739744 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 462 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 44-656 |
| Cow position: | chr13:49495028-49494405 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 200 |
| Conread position: | 59-718 |
| Cow position: | chr13:3534718-3534098 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 435 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 116-694 |
| Cow position: | chr13:728456-729041 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 372 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 152-722 |
| Cow position: | chr13:29225812-29225255 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 372 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 179-718 |
| Cow position: | chr13:32735903-32735359 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 244-718 |
| Cow position: | chr13:3760287-3759794 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 255-700 |
| Cow position: | chr13:28788247-28788705 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 299 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 255-707 |
| Cow position: | chr13:1048663-1048211 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 303 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 216, 65 |
| Conread position: | 256-718 |
| Cow position: | chr13:31729549-31729062 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 327 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 256-718 |
| Cow position: | chr13:34869326-34869796 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 311 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 352-703 |
| Cow position: | chr13:34019313-34018943 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 366-722 |
| Cow position: | chr13:4666557-4666919 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 98, 50 |
| Conread position: | 373-718 |
| Cow position: | chr13:15922989-15922623 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 256 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 91, 118 |
| Conread position: | 378-704 |
| Cow position: | chr13:20540360-20540017 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 115, 122 |
| Conread position: | 378-718 |
| Cow position: | chr13:54239967-54239605 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 86, 113 |
| Conread position: | 378-721 |
| Cow position: | chr13:61084391-61084749 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 13, 58 |
| Conread position: | 380-718 |
| Cow position: | chr13:11388683-11389040 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 66 |
| Conread position: | 381-720 |
| Cow position: | chr13:27736111-27735775 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 83, 58 |
| Conread position: | 382-722 |
| Cow position: | chr13:28343634-28343277 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 113 |
| Conread position: | 384-622 |
| Cow position: | chr13:32547967-32548221 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 400-702 |
| Cow position: | chr13:38623650-38623963 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 74, 45 |
| Conread position: | 406-661 |
| Cow position: | chr13:15884565-15884293 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 129, 56 |
| Conread position: | 414-718 |
| Cow position: | chr13:18331598-18331272 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 314 |
| Conread position: | 428-718 |
| Cow position: | chr13:15558864-15559175 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 63 |
| Conread position: | 434-719 |
| Cow position: | chr13:19122960-19122659 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 49, 263 |
| Conread position: | 452-690 |
| Cow position: | chr13:44651330-44651085 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 194 |
| Conread position: | 453-718 |
| Cow position: | chr13:16921007-16921293 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 453-718 |
| Cow position: | chr13:23454984-23455270 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 453-718 |
| Cow position: | chr13:49613987-49613701 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 464-718 |
| Cow position: | chr13:59979701-59979427 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 262 |
| Conread position: | 475-699 |
| Cow position: | chr13:33817151-33816911 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 500-718 |
| Cow position: | chr13:17310014-17310251 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 224 |
Show alignments to all cow chromosomes.