Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-602 |
| Cow position: | chr14:47643273-47643872 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 402 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 81, 92 |
| Conread position: | 1-704 |
| Cow position: | chr14:29224123-29223377 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 479 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 41, 266 |
| Conread position: | 1-718 |
| Cow position: | chr14:45710753-45710036 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 185 |
| Conread position: | 1-720 |
| Cow position: | chr14:5530039-5530770 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 2-702 |
| Cow position: | chr14:38814502-38813788 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 435 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 11-718 |
| Cow position: | chr14:191032-191759 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 204 |
| Conread position: | 11-718 |
| Cow position: | chr14:16918735-16918022 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 468 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 27, 200 |
| Conread position: | 12-722 |
| Cow position: | chr14:33605927-33605244 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 14-621 |
| Cow position: | chr14:16342902-16342293 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 372 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 118, 76 |
| Conread position: | 16-357 |
| Cow position: | chr14:20971214-20970875 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 16-718 |
| Cow position: | chr14:13303951-13304667 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 470 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 69, 29 |
| Conread position: | 20-696 |
| Cow position: | chr14:12611409-12612080 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 443 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 165 |
| Conread position: | 23-602 |
| Cow position: | chr14:20783473-20784052 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 21 |
| Conread position: | 23-718 |
| Cow position: | chr14:7473357-7474060 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr14:13779957-13780659 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 23-718 |
| Cow position: | chr14:17000051-16999341 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr14:19327257-19326553 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr14:30595354-30594644 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 457 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 93 |
| Conread position: | 24-718 |
| Cow position: | chr14:43559238-43559939 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 457 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 26-236 |
| Cow position: | chr14:12124176-12123961 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr14:13089860-13090510 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 441 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 101 |
| Conread position: | 29-701 |
| Cow position: | chr14:751576-752260 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 30-704 |
| Cow position: | chr14:23256353-23255663 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 38-505 |
| Cow position: | chr14:12340632-12340174 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 40-718 |
| Cow position: | chr14:48826300-48826981 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 447 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 112, 34 |
| Conread position: | 42-718 |
| Cow position: | chr14:29046652-29045969 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 456 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 160 |
| Conread position: | 43-619 |
| Cow position: | chr14:24522961-24523528 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 395 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 44-718 |
| Cow position: | chr14:16808299-16807613 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 157 |
| Conread position: | 49-720 |
| Cow position: | chr14:12742010-12741336 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 154 |
| Conread position: | 84-715 |
| Cow position: | chr14:37225222-37225863 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 112 |
| Conread position: | 105-551 |
| Cow position: | chr14:32701937-32702386 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 304 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 110-718 |
| Cow position: | chr14:17490242-17489630 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 408 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 93, 24 |
| Conread position: | 255-696 |
| Cow position: | chr14:30660843-30660385 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 302 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 255-718 |
| Cow position: | chr14:35384395-35383923 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 29, 66 |
| Conread position: | 255-718 |
| Cow position: | chr14:42122349-42121874 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 255-718 |
| Cow position: | chr14:44690408-44690885 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 256-718 |
| Cow position: | chr14:33392696-33392214 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 119 |
| Conread position: | 256-718 |
| Cow position: | chr14:46390400-46389924 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 257-706 |
| Cow position: | chr14:20911147-20911613 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 320 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 262-696 |
| Cow position: | chr14:29774887-29774428 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 268-720 |
| Cow position: | chr14:34998365-34998828 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 196, 21 |
| Conread position: | 291-718 |
| Cow position: | chr14:44480356-44480787 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 399-722 |
| Cow position: | chr14:16882471-16882139 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 414-704 |
| Cow position: | chr14:16201786-16201479 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 414-718 |
| Cow position: | chr14:16271941-16271616 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 313 |
| Conread position: | 446-696 |
| Cow position: | chr14:15274132-15273862 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 447-704 |
| Cow position: | chr14:20564255-20563983 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 475-718 |
| Cow position: | chr14:46221527-46221787 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 60, 15 |
Show alignments to all cow chromosomes.