Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-696 |
| Cow position: | chr15:35646704-35646005 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 466 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 79 |
| Conread position: | 1-704 |
| Cow position: | chr15:9430910-9431628 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 466 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 1-704 |
| Cow position: | chr15:50122957-50122243 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 204 |
| Conread position: | 1-715 |
| Cow position: | chr15:7545822-7546578 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 471 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 344 |
| Conread position: | 1-718 |
| Cow position: | chr15:18266805-18266053 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 484 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 207 |
| Conread position: | 1-718 |
| Cow position: | chr15:32492903-32492175 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 57 |
| Conread position: | 2-696 |
| Cow position: | chr15:1765294-1765983 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 467 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 110 |
| Conread position: | 2-702 |
| Cow position: | chr15:6591142-6590421 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 162 |
| Conread position: | 4-715 |
| Cow position: | chr15:8100446-8101153 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 5-718 |
| Cow position: | chr15:2077649-2078353 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 40 |
| Conread position: | 11-714 |
| Cow position: | chr15:4726188-4726906 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 11-718 |
| Cow position: | chr15:20411580-20412303 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 196 |
| Conread position: | 15-602 |
| Cow position: | chr15:21948156-21947585 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 401 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 115 |
| Conread position: | 23-699 |
| Cow position: | chr15:32067604-32066921 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 452 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-712 |
| Cow position: | chr15:7838272-7838973 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr15:4386759-4387460 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr15:15346104-15345398 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr15:18577721-18578418 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 24-602 |
| Cow position: | chr15:18331833-18331254 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 381 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 24-704 |
| Cow position: | chr15:6154927-6154237 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 179 |
| Conread position: | 24-718 |
| Cow position: | chr15:2901262-2900545 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 466 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 20, 228 |
| Conread position: | 24-718 |
| Cow position: | chr15:17036652-17035958 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 24-718 |
| Cow position: | chr15:21664738-21664034 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 462 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 25-718 |
| Cow position: | chr15:6561590-6562294 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 25-718 |
| Cow position: | chr15:35736803-35737503 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 454 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 26-704 |
| Cow position: | chr15:7564001-7564693 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr15:107005-107709 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr15:25205999-25205299 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 26-718 |
| Cow position: | chr15:33122382-33123088 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 41-701 |
| Cow position: | chr15:1318444-1319107 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 43-718 |
| Cow position: | chr15:4923165-4923856 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 159 |
| Conread position: | 59-692 |
| Cow position: | chr15:25319287-25318670 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 401 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 76-542 |
| Cow position: | chr15:40648362-40647898 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 313 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 82-718 |
| Cow position: | chr15:9003161-9002517 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 431 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 32, 124 |
| Conread position: | 113-696 |
| Cow position: | chr15:4686826-4687417 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 381 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 82, 24 |
| Conread position: | 137-702 |
| Cow position: | chr15:10478405-10477836 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 375 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 145-718 |
| Cow position: | chr15:7235456-7236017 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 381 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 256-722 |
| Cow position: | chr15:4081008-4080525 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 106 |
| Conread position: | 265-622 |
| Cow position: | chr15:53658666-53658293 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 106 |
| Conread position: | 266-705 |
| Cow position: | chr15:29970082-29969633 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 12, 96 |
| Conread position: | 330-713 |
| Cow position: | chr15:12419409-12419005 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 331-694 |
| Cow position: | chr15:29342699-29342328 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 8, 47 |
| Conread position: | 365-718 |
| Cow position: | chr15:16190436-16190063 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 373-696 |
| Cow position: | chr15:8410392-8410721 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 92, 32 |
| Conread position: | 374-695 |
| Cow position: | chr15:38982006-38982348 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 90, 254 |
| Conread position: | 377-661 |
| Cow position: | chr15:8810971-8810665 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 377-717 |
| Cow position: | chr15:6329387-6329749 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 117 |
| Conread position: | 378-722 |
| Cow position: | chr15:22239664-22239312 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 380-718 |
| Cow position: | chr15:41787331-41786994 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 18 |
| Conread position: | 380-722 |
| Cow position: | chr15:24041621-24041979 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 381-704 |
| Cow position: | chr15:50148682-50149027 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 83, 111 |
| Conread position: | 434-715 |
| Cow position: | chr15:4198164-4198467 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 434-718 |
| Cow position: | chr15:36144014-36144315 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 442-718 |
| Cow position: | chr15:6614430-6614727 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 442-718 |
| Cow position: | chr15:42938204-42938498 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 453-718 |
| Cow position: | chr15:17076006-17075721 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 475-704 |
| Cow position: | chr15:32712656-32712902 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 475-718 |
| Cow position: | chr15:23667385-23667125 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 486-704 |
| Cow position: | chr15:24296649-24296887 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 496-718 |
| Cow position: | chr15:36330994-36330752 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 229 |
Show alignments to all cow chromosomes.