Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-243 |
| Cow position: | chr16:13410569-13410818 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 61 |
| Conread position: | 1-544 |
| Cow position: | chr16:5871522-5872064 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 348 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 1-695 |
| Cow position: | chr16:10568282-10568976 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 1-702 |
| Cow position: | chr16:27299509-27298812 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 162 |
| Conread position: | 1-718 |
| Cow position: | chr16:5527757-5527030 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 1-718 |
| Cow position: | chr16:28470442-28469695 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 1-718 |
| Cow position: | chr16:34530933-34531653 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 475 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 36, 158 |
| Conread position: | 2-720 |
| Cow position: | chr16:51403241-51402518 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 455 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 46, 204 |
| Conread position: | 3-713 |
| Cow position: | chr16:15567901-15568614 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 41 |
| Conread position: | 3-721 |
| Cow position: | chr16:30072056-30072766 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 485 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 10, 126 |
| Conread position: | 5-718 |
| Cow position: | chr16:37480213-37479490 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 5-720 |
| Cow position: | chr16:52591032-52590332 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 459 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 11-666 |
| Cow position: | chr16:15185716-15186387 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 452 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 27, 199 |
| Conread position: | 11-720 |
| Cow position: | chr16:16228962-16229669 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 467 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 164 |
| Conread position: | 23-718 |
| Cow position: | chr16:7675788-7675097 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 23-718 |
| Cow position: | chr16:25342633-25343335 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr16:29047686-29048389 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr16:40295499-40294801 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr16:43896599-43895903 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 24-704 |
| Cow position: | chr16:25442288-25442978 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 24-714 |
| Cow position: | chr16:12537285-12536592 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 24-718 |
| Cow position: | chr16:14665152-14664460 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 25-259 |
| Cow position: | chr16:18678018-18678250 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 25-602 |
| Cow position: | chr16:51084813-51085392 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 380 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 25-704 |
| Cow position: | chr16:23671365-23672050 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 25-718 |
| Cow position: | chr16:18618455-18617760 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 446 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 26-718 |
| Cow position: | chr16:27594169-27594873 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 29-718 |
| Cow position: | chr16:8815438-8814746 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 30-602 |
| Cow position: | chr16:3088535-3087963 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 382 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 30-718 |
| Cow position: | chr16:33198-33897 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 30-718 |
| Cow position: | chr16:5662505-5663205 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 38-716 |
| Cow position: | chr16:41572070-41572765 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 432 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 86 |
| Conread position: | 41-721 |
| Cow position: | chr16:46630277-46630947 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 439 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 43-602 |
| Cow position: | chr16:20202651-20203213 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 360 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 17, 157 |
| Conread position: | 43-718 |
| Cow position: | chr16:23983978-23984666 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 158 |
| Conread position: | 48-592 |
| Cow position: | chr16:24940249-24940783 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 347 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 64-461 |
| Cow position: | chr16:46500898-46501288 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 194 |
| Conread position: | 137-718 |
| Cow position: | chr16:5119241-5118653 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 58 |
| Conread position: | 145-704 |
| Cow position: | chr16:28169536-28168971 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 383 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 151-621 |
| Cow position: | chr16:46628775-46629239 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 332 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 125, 89 |
| Conread position: | 242-718 |
| Cow position: | chr16:7465476-7465971 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 255-719 |
| Cow position: | chr16:42060090-42059615 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 256-718 |
| Cow position: | chr16:4474721-4474240 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 317 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 259-704 |
| Cow position: | chr16:12245463-12245008 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 266-704 |
| Cow position: | chr16:26664620-26665079 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 307 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 283-722 |
| Cow position: | chr16:38355201-38354732 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 336-713 |
| Cow position: | chr16:37452109-37451714 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 343-704 |
| Cow position: | chr16:4799741-4799364 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 361-715 |
| Cow position: | chr16:41162482-41162109 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 110, 131 |
| Conread position: | 361-720 |
| Cow position: | chr16:18279571-18279188 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 123, 54 |
| Conread position: | 365-718 |
| Cow position: | chr16:16537794-16538161 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 122, 11 |
| Conread position: | 372-718 |
| Cow position: | chr16:41165760-41165394 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 157 |
| Conread position: | 376-718 |
| Cow position: | chr16:23250978-23250618 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 159, 112 |
| Conread position: | 384-704 |
| Cow position: | chr16:29034910-29035247 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 390-621 |
| Cow position: | chr16:18580992-18580746 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 74, 10 |
| Conread position: | 391-718 |
| Cow position: | chr16:52525247-52525593 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 73, 107 |
| Conread position: | 414-718 |
| Cow position: | chr16:40556872-40556551 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 61, 309 |
| Conread position: | 434-718 |
| Cow position: | chr16:49744383-49744079 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 292 |
| Conread position: | 452-715 |
| Cow position: | chr16:3770938-3770654 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 275 |
| Conread position: | 489-700 |
| Cow position: | chr16:6944391-6944619 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 181 |
Show alignments to all cow chromosomes.