Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-696 |
| Cow position: | chr17:20489526-20490227 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 465 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 36, 88 |
| Conread position: | 1-719 |
| Cow position: | chr17:4083226-4083945 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 460 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 46, 211 |
| Conread position: | 2-704 |
| Cow position: | chr17:182779-183498 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 468 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 36, 204 |
| Conread position: | 11-696 |
| Cow position: | chr17:40806021-40806725 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 196 |
| Conread position: | 23-718 |
| Cow position: | chr17:6069785-6070469 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 455 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr17:15851928-15852633 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 24-718 |
| Cow position: | chr17:2246850-2246149 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 174 |
| Conread position: | 24-718 |
| Cow position: | chr17:28027271-28026567 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 60 |
| Conread position: | 24-720 |
| Cow position: | chr17:24028768-24028063 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 174 |
| Conread position: | 26-699 |
| Cow position: | chr17:23323215-23322525 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 26-704 |
| Cow position: | chr17:15437020-15437711 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-704 |
| Cow position: | chr17:24783398-24784088 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-709 |
| Cow position: | chr17:14936734-14936042 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr17:11784094-11784807 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr17:39049451-39050151 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 27-721 |
| Cow position: | chr17:36001816-36001127 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 220 |
| Conread position: | 29-718 |
| Cow position: | chr17:6261100-6261788 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 6 |
| Conread position: | 30-718 |
| Cow position: | chr17:43989744-43990434 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 6 |
| Conread position: | 38-718 |
| Cow position: | chr17:15326526-15327217 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 145-715 |
| Cow position: | chr17:135990-136563 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 385 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 144, 50 |
| Conread position: | 147-704 |
| Cow position: | chr17:15685773-15686331 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 378 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 131, 48 |
| Conread position: | 163-718 |
| Cow position: | chr17:39818-40380 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 234-480 |
| Cow position: | chr17:20810202-20809965 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 256-693 |
| Cow position: | chr17:19267387-19266927 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 309 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 256-699 |
| Cow position: | chr17:6121244-6121708 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 115 |
| Conread position: | 256-718 |
| Cow position: | chr17:2554816-2554335 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 319 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 256-718 |
| Cow position: | chr17:19980677-19980199 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 318 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 36, 104 |
| Conread position: | 256-718 |
| Cow position: | chr17:34159186-34159668 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 257-719 |
| Cow position: | chr17:16121147-16120668 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 314 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 259-710 |
| Cow position: | chr17:4346117-4345660 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 331-718 |
| Cow position: | chr17:2581365-2581769 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 133, 39 |
| Conread position: | 343-704 |
| Cow position: | chr17:239809-240192 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 149 |
| Conread position: | 365-718 |
| Cow position: | chr17:34574310-34574683 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 365-718 |
| Cow position: | chr17:45271552-45271179 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 373-621 |
| Cow position: | chr17:8070034-8069774 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 109, 70 |
| Conread position: | 379-608 |
| Cow position: | chr17:8143347-8143590 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 380-718 |
| Cow position: | chr17:8210222-8210580 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 382-621 |
| Cow position: | chr17:33486249-33486492 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 385-722 |
| Cow position: | chr17:8497327-8496985 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 79, 152 |
| Conread position: | 429-721 |
| Cow position: | chr17:23039815-23040117 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 38, 121 |
| Conread position: | 433-718 |
| Cow position: | chr17:29826346-29826039 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 434-718 |
| Cow position: | chr17:14241444-14241744 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 475-718 |
| Cow position: | chr17:16153487-16153748 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 475-718 |
| Cow position: | chr17:36283700-36283960 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 489-700 |
| Cow position: | chr17:35017792-35018015 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 531-718 |
| Cow position: | chr17:2263911-2264107 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 184 |
| Conread position: | 540-718 |
| Cow position: | chr17:15710254-15710067 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 64, 174 |
Show alignments to all cow chromosomes.