Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-356 |
| Cow position: | chr18:33142659-33143009 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 46 |
| Conread position: | 1-552 |
| Cow position: | chr18:46884238-46883711 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 366 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 86, 183 |
| Conread position: | 1-696 |
| Cow position: | chr18:4947378-4948069 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 462 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 59, 42 |
| Conread position: | 1-696 |
| Cow position: | chr18:33270333-33271021 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 124 |
| Conread position: | 1-715 |
| Cow position: | chr18:51482269-51482999 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 205 |
| Conread position: | 1-718 |
| Cow position: | chr18:23799060-23799792 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 179 |
| Conread position: | 1-718 |
| Cow position: | chr18:29865197-29864463 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 111 |
| Conread position: | 1-718 |
| Cow position: | chr18:47742916-47743639 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 485 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 37, 209 |
| Conread position: | 5-718 |
| Cow position: | chr18:27988612-27989333 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 40 |
| Conread position: | 23-704 |
| Cow position: | chr18:36510060-36510752 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 24-718 |
| Cow position: | chr18:14131835-14132532 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 24-718 |
| Cow position: | chr18:16175179-16174473 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 25-242 |
| Cow position: | chr18:6061368-6061150 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 111 |
| Conread position: | 25-509 |
| Cow position: | chr18:43337616-43337133 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 61, 95 |
| Conread position: | 33-564 |
| Cow position: | chr18:17999994-17999483 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 35-720 |
| Cow position: | chr18:37490282-37490972 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 161 |
| Conread position: | 38-487 |
| Cow position: | chr18:40315975-40315557 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 47, 92 |
| Conread position: | 39-700 |
| Cow position: | chr18:14421739-14422399 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 101 |
| Conread position: | 43-697 |
| Cow position: | chr18:34032654-34033297 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 413 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 158 |
| Conread position: | 43-704 |
| Cow position: | chr18:5534470-5535141 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 158 |
| Conread position: | 72-685 |
| Cow position: | chr18:35373273-35372659 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 406 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 82-718 |
| Cow position: | chr18:24617638-24618281 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 115-718 |
| Cow position: | chr18:25921928-25922534 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 148-718 |
| Cow position: | chr18:42516197-42516759 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 365 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 166-717 |
| Cow position: | chr18:40482586-40483143 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 379 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 249-602 |
| Cow position: | chr18:54106758-54107128 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 256-704 |
| Cow position: | chr18:32166256-32165794 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 317 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 28, 114 |
| Conread position: | 256-718 |
| Cow position: | chr18:11273190-11272710 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 319 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 257-721 |
| Cow position: | chr18:19336251-19336724 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 259-722 |
| Cow position: | chr18:35290326-35290806 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 325 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 215, 23 |
| Conread position: | 267-691 |
| Cow position: | chr18:12358258-12358679 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 284 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 317-703 |
| Cow position: | chr18:26830752-26831152 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 215, 56 |
| Conread position: | 345-718 |
| Cow position: | chr18:16465106-16464713 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 273 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 362-700 |
| Cow position: | chr18:37701721-37701361 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 102, 130 |
| Conread position: | 365-718 |
| Cow position: | chr18:23703311-23702939 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 99, 23 |
| Conread position: | 372-721 |
| Cow position: | chr18:23446867-23446508 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 165, 26 |
| Conread position: | 373-696 |
| Cow position: | chr18:41839007-41838660 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 378-722 |
| Cow position: | chr18:18495242-18494887 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 86, 75 |
| Conread position: | 379-718 |
| Cow position: | chr18:9722412-9722772 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 113 |
| Conread position: | 380-670 |
| Cow position: | chr18:37584118-37583806 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 380-696 |
| Cow position: | chr18:27836296-27835958 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 97, 128 |
| Conread position: | 389-602 |
| Cow position: | chr18:24593342-24593122 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 418-704 |
| Cow position: | chr18:44149568-44149268 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 453-704 |
| Cow position: | chr18:22183662-22183391 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 453-718 |
| Cow position: | chr18:51460983-51460696 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 457-722 |
| Cow position: | chr18:8646206-8646478 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 79, 108 |
Show alignments to all cow chromosomes.