Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-448 |
| Cow position: | chr2:20030283-20030719 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 70 |
| Conread position: | 1-718 |
| Cow position: | chr2:9958208-9957476 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 1-718 |
| Cow position: | chr2:26070111-26069394 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 137 |
| Conread position: | 3-718 |
| Cow position: | chr2:12696606-12695871 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 11-718 |
| Cow position: | chr2:52063633-52064351 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 193 |
| Conread position: | 11-718 |
| Cow position: | chr2:80291885-80291172 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 16-239 |
| Cow position: | chr2:44554211-44553988 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 91 |
| Conread position: | 16-704 |
| Cow position: | chr2:905145-905844 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 450 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 23-696 |
| Cow position: | chr2:28648713-28648035 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 23 |
| Conread position: | 23-715 |
| Cow position: | chr2:47811741-47812442 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 23-717 |
| Cow position: | chr2:28794133-28794825 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr2:8119436-8120138 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 23-718 |
| Cow position: | chr2:10185335-10184631 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 23-718 |
| Cow position: | chr2:10264515-10263820 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr2:12223391-12222687 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 179 |
| Conread position: | 23-718 |
| Cow position: | chr2:25887658-25886958 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 24-715 |
| Cow position: | chr2:574482-575177 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 447 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 115, 20 |
| Conread position: | 24-718 |
| Cow position: | chr2:281797-281099 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 24-718 |
| Cow position: | chr2:65937346-65936632 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 186 |
| Conread position: | 25-696 |
| Cow position: | chr2:11158230-11157547 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 26-602 |
| Cow position: | chr2:39422517-39423094 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-670 |
| Cow position: | chr2:52617368-52618024 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 26-701 |
| Cow position: | chr2:364175-363485 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr2:9908806-9909519 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr2:26922319-26923022 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr2:50323991-50324669 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 467 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 26-718 |
| Cow position: | chr2:53540831-53541532 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 29-700 |
| Cow position: | chr2:72688505-72689188 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 443 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 29-718 |
| Cow position: | chr2:42669811-42669108 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 29-718 |
| Cow position: | chr2:50078463-50079154 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 7 |
| Conread position: | 30-704 |
| Cow position: | chr2:47037537-47036849 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-715 |
| Cow position: | chr2:6005948-6005256 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 454 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 30-718 |
| Cow position: | chr2:54738385-54739078 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 38-308 |
| Cow position: | chr2:10681386-10681646 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 43-670 |
| Cow position: | chr2:6962420-6963059 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 420 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 5, 132 |
| Conread position: | 43-718 |
| Cow position: | chr2:4402242-4401555 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 158 |
| Conread position: | 44-722 |
| Cow position: | chr2:45915930-45915249 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 454 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 155 |
| Conread position: | 45-718 |
| Cow position: | chr2:50982231-50981553 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 130 |
| Conread position: | 53-718 |
| Cow position: | chr2:14209904-14209238 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 59-722 |
| Cow position: | chr2:63518898-63519567 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 135 |
| Conread position: | 90-718 |
| Cow position: | chr2:12479305-12478666 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 413 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 98-718 |
| Cow position: | chr2:43440422-43441057 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 407 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 18, 116 |
| Conread position: | 107-722 |
| Cow position: | chr2:58795441-58794851 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 396 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 70 |
| Conread position: | 113-718 |
| Cow position: | chr2:11558831-11559445 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 84 |
| Conread position: | 116-696 |
| Cow position: | chr2:41181098-41181670 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 393 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 137-718 |
| Cow position: | chr2:2087161-2086574 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 393 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 66, 58 |
| Conread position: | 142-356 |
| Cow position: | chr2:62815216-62815424 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 142-718 |
| Cow position: | chr2:32639957-32640535 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 145-702 |
| Cow position: | chr2:59412698-59412150 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 374 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 58, 50 |
| Conread position: | 249-718 |
| Cow position: | chr2:19012463-19012952 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 254-722 |
| Cow position: | chr2:5294014-5294512 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 329 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 27, 482 |
| Conread position: | 256-718 |
| Cow position: | chr2:5869018-5868536 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 321 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 77, 47 |
| Conread position: | 256-722 |
| Cow position: | chr2:975571-975082 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 317 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 266-696 |
| Cow position: | chr2:3788757-3788332 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 18 |
| Conread position: | 266-718 |
| Cow position: | chr2:2601825-2602295 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 304 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 325-719 |
| Cow position: | chr2:10879305-10879702 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 158, 34 |
| Conread position: | 361-602 |
| Cow position: | chr2:32411021-32410772 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 361-621 |
| Cow position: | chr2:68763069-68762792 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 363-718 |
| Cow position: | chr2:67188827-67189186 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 365-718 |
| Cow position: | chr2:8085217-8085590 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 365-718 |
| Cow position: | chr2:46049014-46048641 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 373-718 |
| Cow position: | chr2:4932957-4932595 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 106, 72 |
| Conread position: | 373-718 |
| Cow position: | chr2:10466817-10467180 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 91, 65 |
| Conread position: | 373-722 |
| Cow position: | chr2:56897223-56896859 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 100, 38 |
| Conread position: | 377-704 |
| Cow position: | chr2:42331626-42331275 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 106, 15 |
| Conread position: | 378-670 |
| Cow position: | chr2:74493618-74493307 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 378-704 |
| Cow position: | chr2:12328880-12329222 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 88, 46 |
| Conread position: | 379-622 |
| Cow position: | chr2:19984080-19983828 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 60 |
| Conread position: | 380-718 |
| Cow position: | chr2:39117859-39118210 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 381-701 |
| Cow position: | chr2:26904536-26904193 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 111 |
| Conread position: | 400-621 |
| Cow position: | chr2:44092616-44092852 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 75, 92 |
| Conread position: | 401-714 |
| Cow position: | chr2:32863343-32863016 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 414-718 |
| Cow position: | chr2:34580569-34580248 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 434-718 |
| Cow position: | chr2:46184246-46183943 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 273 |
| Conread position: | 442-718 |
| Cow position: | chr2:34501121-34500824 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 453-667 |
| Cow position: | chr2:78226560-78226782 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 479-718 |
| Cow position: | chr2:4451705-4451961 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 491-718 |
| Cow position: | chr2:24687031-24687277 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 233 |
| Conread position: | 506-718 |
| Cow position: | chr2:6640168-6640399 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 218 |
Show alignments to all cow chromosomes.