Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-355 |
| Cow position: | chr21:47888386-47888737 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 101 |
| Conread position: | 1-694 |
| Cow position: | chr21:13185120-13185792 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 452 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 1-703 |
| Cow position: | chr21:22751926-22751260 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 42 |
| Conread position: | 1-704 |
| Cow position: | chr21:19612246-19612969 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 210 |
| Conread position: | 1-718 |
| Cow position: | chr21:27069472-27068738 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 251 |
| Conread position: | 1-718 |
| Cow position: | chr21:28256931-28257641 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 468 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 1-718 |
| Cow position: | chr21:31514826-31514091 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 206 |
| Conread position: | 1-718 |
| Cow position: | chr21:47942437-47943172 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 217 |
| Conread position: | 2-696 |
| Cow position: | chr21:1286724-1286010 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 214 |
| Conread position: | 5-718 |
| Cow position: | chr21:10568207-10568917 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 11-696 |
| Cow position: | chr21:35774433-35775110 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 61 |
| Conread position: | 23-718 |
| Cow position: | chr21:5018661-5019368 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr21:27284990-27285673 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr21:30563195-30563889 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 24-722 |
| Cow position: | chr21:405638-404948 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 25-704 |
| Cow position: | chr21:26836703-26837400 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 448 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 192 |
| Conread position: | 25-704 |
| Cow position: | chr21:39426594-39427276 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 5 |
| Conread position: | 25-718 |
| Cow position: | chr21:997315-996615 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 463 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 29-544 |
| Cow position: | chr21:9893489-9893999 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 349 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 30-696 |
| Cow position: | chr21:37372762-37373431 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 30-704 |
| Cow position: | chr21:2512375-2513062 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 35-602 |
| Cow position: | chr21:29004006-29003424 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 38-722 |
| Cow position: | chr21:30163531-30162853 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 454 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 39-500 |
| Cow position: | chr21:23708759-23709208 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 41-238 |
| Cow position: | chr21:41404851-41405055 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 42-702 |
| Cow position: | chr21:147460-148132 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 158 |
| Conread position: | 47-704 |
| Cow position: | chr21:36979368-36978692 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 425 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 42, 176 |
| Conread position: | 72-701 |
| Cow position: | chr21:33710716-33711344 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 431 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 12, 129 |
| Conread position: | 74-700 |
| Cow position: | chr21:14645435-14644811 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 142-718 |
| Cow position: | chr21:44764306-44763728 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 20 |
| Conread position: | 256-704 |
| Cow position: | chr21:42915552-42916017 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 116 |
| Conread position: | 257-720 |
| Cow position: | chr21:7154081-7154561 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 314 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 259-618 |
| Cow position: | chr21:22871780-22872134 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 260-718 |
| Cow position: | chr21:26402008-26401527 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 331-720 |
| Cow position: | chr21:21622109-21622496 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 348-695 |
| Cow position: | chr21:45907853-45907495 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 116, 22 |
| Conread position: | 371-704 |
| Cow position: | chr21:8835858-8836201 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 111, 61 |
| Conread position: | 371-715 |
| Cow position: | chr21:434010-433652 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 371-720 |
| Cow position: | chr21:32832366-32831989 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 96, 5 |
| Conread position: | 372-691 |
| Cow position: | chr21:41405308-41405638 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 102, 20 |
| Conread position: | 373-718 |
| Cow position: | chr21:5011875-5011518 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 91, 119 |
| Conread position: | 376-721 |
| Cow position: | chr21:21292584-21292231 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 89, 328 |
| Conread position: | 384-704 |
| Cow position: | chr21:36980524-36980856 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 51 |
| Conread position: | 400-704 |
| Cow position: | chr21:4036136-4036462 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 71, 92 |
| Conread position: | 413-718 |
| Cow position: | chr21:43564208-43563883 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 418-662 |
| Cow position: | chr21:32897938-32897684 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 419-718 |
| Cow position: | chr21:6967557-6967237 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 433-602 |
| Cow position: | chr21:21785635-21785803 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 34 |
| Conread position: | 475-718 |
| Cow position: | chr21:27149593-27149333 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 477-696 |
| Cow position: | chr21:29949759-29949997 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 12 |
Show alignments to all cow chromosomes.