Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-354 |
| Cow position: | chr22:10304012-10303663 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 1-602 |
| Cow position: | chr22:35912125-35911539 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 399 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 76 |
| Conread position: | 1-703 |
| Cow position: | chr22:694933-695659 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 475 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 37, 185 |
| Conread position: | 1-715 |
| Cow position: | chr22:44348541-44347830 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 466 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 167 |
| Conread position: | 1-718 |
| Cow position: | chr22:44368165-44367427 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 1-718 |
| Cow position: | chr22:44492372-44493103 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 480 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 32, 208 |
| Conread position: | 3-704 |
| Cow position: | chr22:296774-297489 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 27 |
| Conread position: | 5-718 |
| Cow position: | chr22:559373-558653 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 11-704 |
| Cow position: | chr22:1268426-1267725 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 458 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 11-715 |
| Cow position: | chr22:36860210-36859500 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 34 |
| Conread position: | 23-715 |
| Cow position: | chr22:37292324-37291625 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr22:1519670-1518979 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 22 |
| Conread position: | 23-718 |
| Cow position: | chr22:31333694-31332998 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 23-718 |
| Cow position: | chr22:34169690-34170390 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr22:39468164-39467460 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr22:42992526-42993225 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 24-718 |
| Cow position: | chr22:21590768-21591477 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 226 |
| Conread position: | 26-680 |
| Cow position: | chr22:6022015-6022669 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 436 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 181, 21 |
| Conread position: | 26-718 |
| Cow position: | chr22:1880155-1880860 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 26-718 |
| Cow position: | chr22:11803700-11803000 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr22:20239488-20238785 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 27-722 |
| Cow position: | chr22:13547422-13546727 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 182 |
| Conread position: | 30-444 |
| Cow position: | chr22:21195142-21194737 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 272 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-704 |
| Cow position: | chr22:30677359-30676672 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-718 |
| Cow position: | chr22:538466-539160 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-718 |
| Cow position: | chr22:35670309-35669616 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 35-622 |
| Cow position: | chr22:13673448-13672873 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 405 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 5, 96 |
| Conread position: | 36-718 |
| Cow position: | chr22:5313642-5314343 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 457 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 39-718 |
| Cow position: | chr22:4242272-4241587 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 445 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 52-714 |
| Cow position: | chr22:45014727-45015395 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 441 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 33, 101 |
| Conread position: | 98-718 |
| Cow position: | chr22:34601018-34601634 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 408 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 35, 6 |
| Conread position: | 113-355 |
| Cow position: | chr22:2718460-2718223 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 165, 21 |
| Conread position: | 142-718 |
| Cow position: | chr22:2563280-2562712 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 379 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 159-715 |
| Cow position: | chr22:29499029-29499592 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 378 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 160-604 |
| Cow position: | chr22:39450301-39450729 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 305 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 157, 82 |
| Conread position: | 249-493 |
| Cow position: | chr22:29332917-29333162 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 123 |
| Conread position: | 250-717 |
| Cow position: | chr22:9046143-9046632 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 323 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 250-721 |
| Cow position: | chr22:10560819-10561295 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 255-701 |
| Cow position: | chr22:1861971-1862426 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 255-718 |
| Cow position: | chr22:15955455-15954977 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 309 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 257-694 |
| Cow position: | chr22:3760227-3759796 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 75, 26 |
| Conread position: | 257-718 |
| Cow position: | chr22:18028845-18029324 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 319 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 89, 114 |
| Conread position: | 259-718 |
| Cow position: | chr22:44459229-44459713 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 324 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 285-602 |
| Cow position: | chr22:36574411-36574087 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 153 |
| Conread position: | 361-702 |
| Cow position: | chr22:2849912-2849555 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 103, 37 |
| Conread position: | 362-722 |
| Cow position: | chr22:23430208-23429832 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 373-655 |
| Cow position: | chr22:48274656-48274354 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 373-680 |
| Cow position: | chr22:36586127-36585821 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 101, 57 |
| Conread position: | 373-704 |
| Cow position: | chr22:15310269-15309916 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 104, 302 |
| Conread position: | 373-718 |
| Cow position: | chr22:28783802-28784168 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 100, 332 |
| Conread position: | 376-718 |
| Cow position: | chr22:29853545-29853908 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 88, 116 |
| Conread position: | 378-695 |
| Cow position: | chr22:35905479-35905139 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 379-714 |
| Cow position: | chr22:34595448-34595791 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 85, 21 |
| Conread position: | 380-701 |
| Cow position: | chr22:10548341-10548684 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 424-718 |
| Cow position: | chr22:6333578-6333865 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 51, 64 |
| Conread position: | 432-696 |
| Cow position: | chr22:41242130-41242411 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 443-718 |
| Cow position: | chr22:32204824-32205118 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 281 |
| Conread position: | 454-694 |
| Cow position: | chr22:49778-50040 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 5 |
| Conread position: | 475-719 |
| Cow position: | chr22:980079-980340 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 491-718 |
| Cow position: | chr22:5889381-5889131 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 44, 237 |
| Conread position: | 540-718 |
| Cow position: | chr22:8132920-8132733 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 64, 174 |
Show alignments to all cow chromosomes.