Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-216 |
| Cow position: | chr24:29408300-29408074 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 202 |
| Conread position: | 1-577 |
| Cow position: | chr24:6344345-6344892 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 382 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 111 |
| Conread position: | 1-696 |
| Cow position: | chr24:40101497-40100804 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 457 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 1-718 |
| Cow position: | chr24:33934792-33935528 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 482 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 37, 88 |
| Conread position: | 2-699 |
| Cow position: | chr24:39492233-39491531 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 207 |
| Conread position: | 11-482 |
| Cow position: | chr24:17278972-17278517 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 206 |
| Conread position: | 11-718 |
| Cow position: | chr24:6337803-6338522 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 468 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 11-718 |
| Cow position: | chr24:12087621-12088338 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 16-602 |
| Cow position: | chr24:36480550-36479940 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 407 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 23-718 |
| Cow position: | chr24:147176-146469 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr24:16560878-16560170 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 25-704 |
| Cow position: | chr24:38585685-38585008 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 451 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 89 |
| Conread position: | 26-602 |
| Cow position: | chr24:23504423-23503844 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 385 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 26-715 |
| Cow position: | chr24:13044191-13043491 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr24:7062979-7063678 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr24:19834837-19835541 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 227 |
| Conread position: | 30-694 |
| Cow position: | chr24:13233699-13234365 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 438 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 30-718 |
| Cow position: | chr24:13189620-13190306 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 459 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 41-714 |
| Cow position: | chr24:5887803-5887131 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 43-718 |
| Cow position: | chr24:12149843-12149149 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 455 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 5, 159 |
| Conread position: | 47-718 |
| Cow position: | chr24:17300458-17299771 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 441 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 94, 35 |
| Conread position: | 49-621 |
| Cow position: | chr24:7089531-7088973 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 371 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 54 |
| Conread position: | 82-718 |
| Cow position: | chr24:6963258-6962610 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 118 |
| Conread position: | 84-718 |
| Cow position: | chr24:14383133-14382480 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 430 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 29, 107 |
| Conread position: | 113-694 |
| Cow position: | chr24:6505118-6504545 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 383 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 90, 25 |
| Conread position: | 114-544 |
| Cow position: | chr24:20286383-20285966 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 114-722 |
| Cow position: | chr24:22321264-22321876 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 405 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 164, 20 |
| Conread position: | 242-715 |
| Cow position: | chr24:23097112-23096632 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 326 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 91, 17 |
| Conread position: | 249-629 |
| Cow position: | chr24:6198546-6198921 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 116 |
| Conread position: | 249-715 |
| Cow position: | chr24:23094372-23093894 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 327 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 253-702 |
| Cow position: | chr24:17313020-17312586 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 255-718 |
| Cow position: | chr24:39678969-39679458 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 314 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 188 |
| Conread position: | 259-703 |
| Cow position: | chr24:40469708-40469249 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 260-718 |
| Cow position: | chr24:19468945-19468469 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 314 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 361-702 |
| Cow position: | chr24:5991400-5991040 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 103, 15 |
| Conread position: | 365-704 |
| Cow position: | chr24:16082733-16082366 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 106, 11 |
| Conread position: | 372-722 |
| Cow position: | chr24:26796628-26796274 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 157 |
| Conread position: | 373-720 |
| Cow position: | chr24:6411252-6411616 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 91, 134 |
| Conread position: | 376-718 |
| Cow position: | chr24:11151347-11150989 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 88, 62 |
| Conread position: | 378-719 |
| Cow position: | chr24:20123597-20123243 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 295 |
| Conread position: | 379-718 |
| Cow position: | chr24:37215231-37214873 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 96 |
| Conread position: | 380-701 |
| Cow position: | chr24:40550404-40550748 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 384-722 |
| Cow position: | chr24:17032247-17031901 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 146, 61 |
| Conread position: | 413-722 |
| Cow position: | chr24:17298910-17298590 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 434-699 |
| Cow position: | chr24:29085346-29085624 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 453-718 |
| Cow position: | chr24:6022227-6021941 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 274 |
| Conread position: | 478-718 |
| Cow position: | chr24:16182477-16182735 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 489-718 |
| Cow position: | chr24:17455245-17454997 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 46, 235 |
| Conread position: | 505-718 |
| Cow position: | chr24:6327461-6327229 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 219 |
Show alignments to all cow chromosomes.