Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-190 |
| Cow position: | chr28:18146373-18146175 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-718 |
| Cow position: | chr28:5567504-5568250 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 474 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 123, 48 |
| Conread position: | 1-718 |
| Cow position: | chr28:6537448-6536705 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 217 |
| Conread position: | 1-718 |
| Cow position: | chr28:6778575-6777841 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 204 |
| Conread position: | 1-718 |
| Cow position: | chr28:7741808-7742526 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 44 |
| Conread position: | 3-718 |
| Cow position: | chr28:1166514-1165798 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 4-544 |
| Cow position: | chr28:29539757-29539207 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 352 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 11-718 |
| Cow position: | chr28:8380410-8381136 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 244 |
| Conread position: | 14-720 |
| Cow position: | chr28:34526520-34525810 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 36 |
| Conread position: | 23-695 |
| Cow position: | chr28:26424863-26424183 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 451 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr28:1506262-1506960 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr28:1813534-1812840 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 23-718 |
| Cow position: | chr28:2085860-2086561 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr28:3190857-3190152 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr28:12151725-12152418 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr28:14703990-14703284 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 23-718 |
| Cow position: | chr28:15034715-15034011 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 23-718 |
| Cow position: | chr28:17389797-17390502 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr28:17665912-17665228 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr28:33637937-33638642 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 24-718 |
| Cow position: | chr28:1216439-1215741 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 6 |
| Conread position: | 24-718 |
| Cow position: | chr28:5938879-5939581 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 25-718 |
| Cow position: | chr28:7003395-7004096 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 25-718 |
| Cow position: | chr28:24668990-24669691 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 458 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 116 |
| Conread position: | 26-718 |
| Cow position: | chr28:484197-483494 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr28:1459491-1460195 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 43-718 |
| Cow position: | chr28:12408813-12408123 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 170 |
| Conread position: | 57-722 |
| Cow position: | chr28:9715117-9714493 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 420 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 58-704 |
| Cow position: | chr28:8719525-8718878 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 67-704 |
| Cow position: | chr28:11504796-11504151 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 423 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 137-684 |
| Cow position: | chr28:22231773-22231225 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 363 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 142-595 |
| Cow position: | chr28:7059147-7058700 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 179-621 |
| Cow position: | chr28:23023780-23024218 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 307 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 256-621 |
| Cow position: | chr28:31591178-31591555 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 257-722 |
| Cow position: | chr28:8782608-8783040 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 270, 23 |
| Conread position: | 257-722 |
| Cow position: | chr28:34420167-34420642 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 308 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 276-705 |
| Cow position: | chr28:28440386-28440820 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 317-627 |
| Cow position: | chr28:26987294-26986985 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 147, 42 |
| Conread position: | 365-621 |
| Cow position: | chr28:15998830-15999101 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 365-718 |
| Cow position: | chr28:17630826-17631199 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 373-702 |
| Cow position: | chr28:8785175-8785517 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 91, 58 |
| Conread position: | 373-704 |
| Cow position: | chr28:25093081-25092746 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 66 |
| Conread position: | 376-704 |
| Cow position: | chr28:9180613-9180948 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 88, 62 |
| Conread position: | 378-718 |
| Cow position: | chr28:24884592-24884945 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 381-673 |
| Cow position: | chr28:308100-307785 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 83, 113 |
| Conread position: | 383-602 |
| Cow position: | chr28:32835234-32835461 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 397-720 |
| Cow position: | chr28:5209869-5210213 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 403-602 |
| Cow position: | chr28:22235988-22235789 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 65 |
| Conread position: | 413-718 |
| Cow position: | chr28:23311534-23311216 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 428-718 |
| Cow position: | chr28:30805549-30805860 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 36, 64 |
Show alignments to all cow chromosomes.