Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-703 |
| Cow position: | chr29:13583410-13584131 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 1-718 |
| Cow position: | chr29:7845718-7846452 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 203 |
| Conread position: | 5-704 |
| Cow position: | chr29:32541442-32542145 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 5-718 |
| Cow position: | chr29:26163493-26162772 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 6-718 |
| Cow position: | chr29:7429782-7429058 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 11-704 |
| Cow position: | chr29:19654964-19655669 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 462 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 190 |
| Conread position: | 11-709 |
| Cow position: | chr29:19526943-19526237 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 191 |
| Conread position: | 15-450 |
| Cow position: | chr29:24335651-24335227 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 283 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 79, 57 |
| Conread position: | 15-602 |
| Cow position: | chr29:36596724-36596140 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 16-538 |
| Cow position: | chr29:37165442-37165933 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 351 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 69, 105 |
| Conread position: | 23-702 |
| Cow position: | chr29:43324882-43325563 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 23-704 |
| Cow position: | chr29:5236380-5237066 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr29:2101198-2101903 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr29:2839983-2839277 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 23-718 |
| Cow position: | chr29:16345573-16346264 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 467 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 22 |
| Conread position: | 23-718 |
| Cow position: | chr29:19621918-19621203 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr29:38228337-38229039 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr29:39078352-39077653 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 23-718 |
| Cow position: | chr29:40501639-40500950 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 24-704 |
| Cow position: | chr29:19888944-19889624 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 176 |
| Conread position: | 24-718 |
| Cow position: | chr29:20252515-20253232 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 470 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 20, 158 |
| Conread position: | 25-241 |
| Cow position: | chr29:38619520-38619300 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 192 |
| Conread position: | 26-718 |
| Cow position: | chr29:10022972-10022268 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr29:13622498-13621794 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr29:21431491-21430798 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr29:31182768-31183466 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr29:32558391-32557688 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 30-719 |
| Cow position: | chr29:609280-608585 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 40-696 |
| Cow position: | chr29:6264628-6263960 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 162 |
| Conread position: | 53-702 |
| Cow position: | chr29:35298296-35298960 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 148 |
| Conread position: | 53-718 |
| Cow position: | chr29:10822530-10821857 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 146 |
| Conread position: | 58-712 |
| Cow position: | chr29:9641395-9640722 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 438 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 27, 153 |
| Conread position: | 113-718 |
| Cow position: | chr29:25931069-25930455 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 82 |
| Conread position: | 137-720 |
| Cow position: | chr29:2465400-2464811 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 393 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 66, 58 |
| Conread position: | 259-718 |
| Cow position: | chr29:10645824-10645347 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 320 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 259-718 |
| Cow position: | chr29:17406710-17407189 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 316 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 260-544 |
| Cow position: | chr29:27812672-27812953 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 43 |
| Conread position: | 316-722 |
| Cow position: | chr29:1002223-1002623 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 39, 61 |
| Conread position: | 328-704 |
| Cow position: | chr29:6214144-6214539 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 136, 19 |
| Conread position: | 361-718 |
| Cow position: | chr29:15996702-15996321 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 376-718 |
| Cow position: | chr29:6874173-6873822 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 200 |
| Conread position: | 376-721 |
| Cow position: | chr29:16730206-16729838 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 92 |
| Conread position: | 380-721 |
| Cow position: | chr29:25936309-25936665 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 414-718 |
| Cow position: | chr29:14082985-14082664 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 419-722 |
| Cow position: | chr29:37044511-37044195 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 118, 87 |
| Conread position: | 424-722 |
| Cow position: | chr29:21460190-21460502 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 425-718 |
| Cow position: | chr29:35275445-35275132 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 301 |
| Conread position: | 428-718 |
| Cow position: | chr29:13922253-13922564 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 432-722 |
| Cow position: | chr29:42849646-42849930 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 453-700 |
| Cow position: | chr29:27978052-27977781 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 507-718 |
| Cow position: | chr29:13606081-13605851 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 28, 217 |
Show alignments to all cow chromosomes.