Cow genome map

Conread name: Ova1-OVRM10074B08

Conread position: 1-621
Cow position: chr3:46503799-46504423 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 148

Conread position: 1-683
Cow position: chr3:6783609-6784310 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 209

Conread position: 1-696
Cow position: chr3:83946188-83946916 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 460
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 266

Conread position: 1-702
Cow position: chr3:6876932-6876227 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 454
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 88

Conread position: 1-704
Cow position: chr3:7247780-7248499 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 204

Conread position: 1-704
Cow position: chr3:68698731-68698009 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 208

Conread position: 1-718
Cow position: chr3:4287331-4288064 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 208

Conread position: 1-718
Cow position: chr3:19879886-19880623 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 177

Conread position: 1-718
Cow position: chr3:29575882-29575141 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 217

Conread position: 1-718
Cow position: chr3:41209360-41208633 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 483
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 35, 208

Conread position: 2-544
Cow position: chr3:3524267-3524797 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 353
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 82, 45

Conread position: 2-718
Cow position: chr3:44925305-44926043 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 207

Conread position: 2-722
Cow position: chr3:24457942-24457212 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 485
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 215

Conread position: 3-703
Cow position: chr3:74058770-74059491 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 215

Conread position: 11-715
Cow position: chr3:6687050-6687771 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 187

Conread position: 11-718
Cow position: chr3:34029657-34028943 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 34

Conread position: 13-689
Cow position: chr3:62503387-62504050 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 37

Conread position: 15-670
Cow position: chr3:23206605-23205943 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 440
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 98, 30

Conread position: 15-722
Cow position: chr3:33706655-33705965 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 7

Conread position: 21-720
Cow position: chr3:19755683-19754981 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 29

Conread position: 23-701
Cow position: chr3:18812773-18813463 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 23-703
Cow position: chr3:72631341-72632020 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 23-718
Cow position: chr3:7478642-7477947 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 460
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 66, 22

Conread position: 23-718
Cow position: chr3:40824667-40825369 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 25

Conread position: 23-718
Cow position: chr3:49136290-49135585 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 23-718
Cow position: chr3:49543929-49543231 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 23-718
Cow position: chr3:57483448-57482746 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 23-718
Cow position: chr3:78026138-78025458 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 24-704
Cow position: chr3:2709596-2708903 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 178

Conread position: 24-718
Cow position: chr3:595407-596108 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 475
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 6, 13

Conread position: 24-718
Cow position: chr3:30315820-30316528 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 6

Conread position: 24-718
Cow position: chr3:56327385-56328097 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 470
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 24

Conread position: 24-718
Cow position: chr3:72671257-72670577 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 464
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 23, 76

Conread position: 25-718
Cow position: chr3:27864455-27865150 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 6

Conread position: 25-718
Cow position: chr3:50916616-50917312 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 463
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 158

Conread position: 26-718
Cow position: chr3:7157444-7156739 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 17

Conread position: 26-718
Cow position: chr3:29330014-29329311 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 26-718
Cow position: chr3:36863182-36862477 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 29-718
Cow position: chr3:34506065-34505373 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 29-718
Cow position: chr3:56295466-56296165 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 30-715
Cow position: chr3:18860696-18861399 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 456
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 54, 23

Conread position: 30-715
Cow position: chr3:66889687-66888991 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 17

Conread position: 30-718
Cow position: chr3:2870068-2870768 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 30-720
Cow position: chr3:40338869-40338166 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 171

Conread position: 30-722
Cow position: chr3:46860010-46859310 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 31-718
Cow position: chr3:30617639-30616960 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 16

Conread position: 38-718
Cow position: chr3:65208470-65209156 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 165

Conread position: 40-670
Cow position: chr3:16887599-16886970 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 44

Conread position: 43-396
Cow position: chr3:8239988-8240328 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 72

Conread position: 43-718
Cow position: chr3:23289043-23288360 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 159

Conread position: 43-718
Cow position: chr3:64026843-64026158 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 167

Conread position: 43-718
Cow position: chr3:68872463-68871777 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 158

Conread position: 43-718
Cow position: chr3:68891278-68890597 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 126

Conread position: 49-680
Cow position: chr3:79431469-79430828 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 420
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 33

Conread position: 74-696
Cow position: chr3:69932502-69931878 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 412
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 129, 8

Conread position: 113-689
Cow position: chr3:53516977-53517557 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 395
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 82

Conread position: 137-700
Cow position: chr3:23944149-23943575 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 386
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 39, 96

Conread position: 137-718
Cow position: chr3:33634643-33635218 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 401
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 66, 37

Conread position: 142-718
Cow position: chr3:43191895-43191312 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 392
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 53

Conread position: 142-718
Cow position: chr3:64652007-64652586 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 395
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 150, 61

Conread position: 173-701
Cow position: chr3:58167103-58167638 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 365
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 105, 64

Conread position: 250-715
Cow position: chr3:45975991-45976473 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 325
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 40, 74

Conread position: 255-720
Cow position: chr3:59863060-59863543 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 324
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 68

Conread position: 256-718
Cow position: chr3:10242152-10242633 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 67

Conread position: 256-718
Cow position: chr3:19940429-19940901 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 327
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 28, 67

Conread position: 256-718
Cow position: chr3:58784657-58784176 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 116

Conread position: 341-722
Cow position: chr3:15054119-15053728 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 133, 29

Conread position: 343-602
Cow position: chr3:64823907-64824175 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 75

Conread position: 361-704
Cow position: chr3:26722784-26723142 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 103, 15

Conread position: 363-697
Cow position: chr3:39024477-39024832 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 101, 13

Conread position: 377-680
Cow position: chr3:56398866-56399187 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 87, 62

Conread position: 380-704
Cow position: chr3:64685479-64685136 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 51

Conread position: 380-718
Cow position: chr3:27920027-27920378 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 84, 112

Conread position: 380-718
Cow position: chr3:28669708-28670061 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 102, 76

Conread position: 380-718
Cow position: chr3:30330522-30330163 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 112

Conread position: 383-704
Cow position: chr3:24587929-24587590 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 82, 15

Conread position: 383-718
Cow position: chr3:18114070-18113716 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 81, 109

Conread position: 391-713
Cow position: chr3:3783374-3783719 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 86, 7

Conread position: 391-713
Cow position: chr3:3787234-3787579 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 86, 7

Conread position: 400-717
Cow position: chr3:44567562-44567223 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 64, 203

Conread position: 405-700
Cow position: chr3:20579827-20579517 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 20

Conread position: 405-721
Cow position: chr3:60081049-60080711 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 68, 322

Conread position: 413-696
Cow position: chr3:29190422-29190116 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 417-718
Cow position: chr3:41081823-41082145 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 47, 75

Conread position: 417-718
Cow position: chr3:48844652-48844974 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 47, 78

Conread position: 424-722
Cow position: chr3:46922287-46921984 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 51, 12

Conread position: 428-701
Cow position: chr3:77425372-77425667 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 428-705
Cow position: chr3:26744190-26743891 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 64

Conread position: 439-713
Cow position: chr3:26683273-26683568 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 53

Conread position: 443-719
Cow position: chr3:31385259-31384974 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 92, 20

Conread position: 470-718
Cow position: chr3:2919330-2919598 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 255

Show alignments to all cow chromosomes.