Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-241 |
| Cow position: | chr4:39931989-39932244 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 177 |
| Conread position: | 1-544 |
| Cow position: | chr4:14755615-14755088 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 359 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 1-699 |
| Cow position: | chr4:41955808-41956529 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 1-702 |
| Cow position: | chr4:34178182-34177496 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 457 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 1-704 |
| Cow position: | chr4:160205-160927 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 205 |
| Conread position: | 1-704 |
| Cow position: | chr4:6865457-6864738 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 1-704 |
| Cow position: | chr4:19005268-19004561 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 481 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 38, 119 |
| Conread position: | 1-704 |
| Cow position: | chr4:46200667-46199977 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 1-715 |
| Cow position: | chr4:12240169-12239460 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 246 |
| Conread position: | 1-718 |
| Cow position: | chr4:530450-531201 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 224 |
| Conread position: | 1-718 |
| Cow position: | chr4:5443781-5443042 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 217 |
| Conread position: | 1-722 |
| Cow position: | chr4:3356876-3356144 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 2-602 |
| Cow position: | chr4:13958223-13958822 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 405 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 40, 127 |
| Conread position: | 5-718 |
| Cow position: | chr4:17924901-17924178 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 11-718 |
| Cow position: | chr4:26876718-26876005 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 11-718 |
| Cow position: | chr4:44726645-44727359 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 13-718 |
| Cow position: | chr4:14819835-14819121 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 465 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 13-718 |
| Cow position: | chr4:16639673-16640391 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 15-602 |
| Cow position: | chr4:38930458-38931041 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 378 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 16-722 |
| Cow position: | chr4:14199239-14199950 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 23-602 |
| Cow position: | chr4:6489274-6488714 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 387 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-702 |
| Cow position: | chr4:36897458-36898141 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 454 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 23-718 |
| Cow position: | chr4:1049178-1048481 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 23-718 |
| Cow position: | chr4:10882632-10883320 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 465 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr4:25598407-25597703 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 24-703 |
| Cow position: | chr4:33494629-33495325 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 24-718 |
| Cow position: | chr4:43318561-43317867 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 25-602 |
| Cow position: | chr4:21359312-21359892 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 374 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 25-704 |
| Cow position: | chr4:16060357-16061045 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 25-718 |
| Cow position: | chr4:30472291-30472996 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 26-621 |
| Cow position: | chr4:9355461-9356059 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-695 |
| Cow position: | chr4:34221830-34222506 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 26-696 |
| Cow position: | chr4:3126889-3127573 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-712 |
| Cow position: | chr4:28653413-28652718 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr4:604709-605399 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr4:6567463-6568162 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 26-718 |
| Cow position: | chr4:17502252-17501548 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 29-718 |
| Cow position: | chr4:32213251-32213955 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 30-696 |
| Cow position: | chr4:14386904-14387578 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-700 |
| Cow position: | chr4:27335014-27335701 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 30-704 |
| Cow position: | chr4:99135-98443 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-718 |
| Cow position: | chr4:1929552-1928856 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-718 |
| Cow position: | chr4:1952482-1951782 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-718 |
| Cow position: | chr4:44780137-44779443 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 32-718 |
| Cow position: | chr4:4417146-4417833 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 458 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 43-718 |
| Cow position: | chr4:18337949-18338636 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 158 |
| Conread position: | 43-718 |
| Cow position: | chr4:18423421-18422742 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 135 |
| Conread position: | 77-696 |
| Cow position: | chr4:13266672-13266063 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 399 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 18, 66 |
| Conread position: | 82-602 |
| Cow position: | chr4:54194438-54194952 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 341 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 110-718 |
| Cow position: | chr4:33022469-33021856 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 24 |
| Conread position: | 142-662 |
| Cow position: | chr4:827408-827936 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 359 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 142-703 |
| Cow position: | chr4:39235655-39235101 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 376 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 145-704 |
| Cow position: | chr4:22742630-22743168 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 345 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 401, 82 |
| Conread position: | 146-718 |
| Cow position: | chr4:48028065-48028636 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 250-718 |
| Cow position: | chr4:33071545-33071058 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 326 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 255-703 |
| Cow position: | chr4:68837697-68837221 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 255-718 |
| Cow position: | chr4:28149713-28150180 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 51 |
| Conread position: | 255-722 |
| Cow position: | chr4:7784545-7785029 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 256-629 |
| Cow position: | chr4:6267889-6267502 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 256-704 |
| Cow position: | chr4:20241821-20242289 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 310 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 256-722 |
| Cow position: | chr4:68943263-68942795 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 257-718 |
| Cow position: | chr4:42924872-42924401 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 259-718 |
| Cow position: | chr4:43898237-43897754 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 319 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 260-696 |
| Cow position: | chr4:12459263-12458824 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 260-713 |
| Cow position: | chr4:44741958-44741489 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 315 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 266-602 |
| Cow position: | chr4:871809-872144 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 269-721 |
| Cow position: | chr4:43238471-43238022 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 301 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 324-703 |
| Cow position: | chr4:43413310-43413693 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 274 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 148, 33 |
| Conread position: | 349-621 |
| Cow position: | chr4:9133875-9133597 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 28 |
| Conread position: | 365-699 |
| Cow position: | chr4:65222350-65221995 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 365-718 |
| Cow position: | chr4:15460855-15460482 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 376-697 |
| Cow position: | chr4:9484380-9484045 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 76 |
| Conread position: | 377-695 |
| Cow position: | chr4:25912857-25913195 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 380-709 |
| Cow position: | chr4:27655160-27654810 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 380-718 |
| Cow position: | chr4:7731028-7730670 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 84, 48 |
| Conread position: | 417-718 |
| Cow position: | chr4:25981387-25981698 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 429-706 |
| Cow position: | chr4:11813552-11813840 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 431-718 |
| Cow position: | chr4:7509188-7509491 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 463-718 |
| Cow position: | chr4:40216344-40216619 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 474-718 |
| Cow position: | chr4:46586382-46586120 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 61, 16 |
Show alignments to all cow chromosomes.