Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-661 |
| Cow position: | chr7:67800206-67800880 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 443 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 1-696 |
| Cow position: | chr7:5261539-5260838 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 1-707 |
| Cow position: | chr7:62445767-62445048 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 46 |
| Conread position: | 1-713 |
| Cow position: | chr7:24807103-24806379 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 190 |
| Conread position: | 1-715 |
| Cow position: | chr7:27100910-27100180 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 205 |
| Conread position: | 1-718 |
| Cow position: | chr7:67676457-67677181 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 468 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 3-718 |
| Cow position: | chr7:38398208-38398931 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 5-720 |
| Cow position: | chr7:34487304-34488029 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 11-718 |
| Cow position: | chr7:13532516-13531794 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 34 |
| Conread position: | 11-718 |
| Cow position: | chr7:39793254-39793970 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 11-720 |
| Cow position: | chr7:8143590-8142859 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 476 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 29, 198 |
| Conread position: | 13-215 |
| Cow position: | chr7:22187207-22187008 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 19-704 |
| Cow position: | chr7:25433787-25434479 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 23-696 |
| Cow position: | chr7:444852-444168 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 26 |
| Conread position: | 23-697 |
| Cow position: | chr7:61578911-61579594 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 23-718 |
| Cow position: | chr7:21126258-21125569 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 24-718 |
| Cow position: | chr7:14138189-14137480 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 464 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 24-718 |
| Cow position: | chr7:14213962-14213274 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 452 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 24-718 |
| Cow position: | chr7:21233599-21232896 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 156 |
| Conread position: | 24-718 |
| Cow position: | chr7:45947742-45947039 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 25-696 |
| Cow position: | chr7:27788364-27789045 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 26-621 |
| Cow position: | chr7:33311536-33310935 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 401 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 26-695 |
| Cow position: | chr7:20060897-20061575 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 26-712 |
| Cow position: | chr7:32187366-32186692 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 30-718 |
| Cow position: | chr7:20773919-20773231 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 30-718 |
| Cow position: | chr7:48805023-48804322 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-718 |
| Cow position: | chr7:52763700-52764399 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-718 |
| Cow position: | chr7:55041072-55040372 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 32-718 |
| Cow position: | chr7:7259937-7260631 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 38-718 |
| Cow position: | chr7:59685232-59685918 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 446 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 47, 161 |
| Conread position: | 41-696 |
| Cow position: | chr7:19046028-19045359 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 429 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 8, 159 |
| Conread position: | 43-718 |
| Cow position: | chr7:57084357-57085034 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 452 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 47-713 |
| Cow position: | chr7:29471904-29472567 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 441 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 86, 35 |
| Conread position: | 74-621 |
| Cow position: | chr7:20369439-20368904 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 111-718 |
| Cow position: | chr7:45952128-45952745 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 403 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 108, 24 |
| Conread position: | 128-718 |
| Cow position: | chr7:60728937-60728342 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 67 |
| Conread position: | 137-702 |
| Cow position: | chr7:37021571-37022151 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 391 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 142-718 |
| Cow position: | chr7:8336894-8337477 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 142-718 |
| Cow position: | chr7:46747521-46748099 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 100 |
| Conread position: | 156-602 |
| Cow position: | chr7:22719305-22718864 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 135, 86 |
| Conread position: | 244-701 |
| Cow position: | chr7:24709167-24708721 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 294 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 249-718 |
| Cow position: | chr7:34150566-34151054 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 333 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 255-696 |
| Cow position: | chr7:65291186-65290728 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 255-704 |
| Cow position: | chr7:33067094-33066626 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 255-718 |
| Cow position: | chr7:49731107-49731588 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 307 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 255-722 |
| Cow position: | chr7:3518912-3519396 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 332 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 256-685 |
| Cow position: | chr7:66906877-66907328 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 308 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 256-700 |
| Cow position: | chr7:37010336-37009872 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 313 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 256-718 |
| Cow position: | chr7:27711064-27711541 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 323 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 258-699 |
| Cow position: | chr7:51938762-51939195 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 270-696 |
| Cow position: | chr7:68439670-68440105 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 349-700 |
| Cow position: | chr7:54119-54478 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 42, 96 |
| Conread position: | 357-718 |
| Cow position: | chr7:37164596-37164976 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 365-718 |
| Cow position: | chr7:112349-112720 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 259 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 373-704 |
| Cow position: | chr7:11421825-11421482 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 162, 102 |
| Conread position: | 375-718 |
| Cow position: | chr7:41874520-41874156 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 167 |
| Conread position: | 376-621 |
| Cow position: | chr7:6646640-6646379 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 117 |
| Conread position: | 376-718 |
| Cow position: | chr7:26928428-26928065 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 88, 351 |
| Conread position: | 377-718 |
| Cow position: | chr7:27458978-27458627 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 172 |
| Conread position: | 380-718 |
| Cow position: | chr7:996679-997031 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 65 |
| Conread position: | 380-718 |
| Cow position: | chr7:6665241-6665600 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 381-722 |
| Cow position: | chr7:40507553-40507911 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 253 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 96, 32 |
| Conread position: | 384-692 |
| Cow position: | chr7:52887809-52888130 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 102 |
| Conread position: | 384-718 |
| Cow position: | chr7:20557539-20557891 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 98, 51 |
| Conread position: | 385-722 |
| Cow position: | chr7:58863740-58863387 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 70, 108 |
| Conread position: | 392-712 |
| Cow position: | chr7:34817411-34817752 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 72, 100 |
| Conread position: | 399-718 |
| Cow position: | chr7:19468651-19468312 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 66, 181 |
| Conread position: | 413-718 |
| Cow position: | chr7:904361-904036 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 79 |
| Conread position: | 421-721 |
| Cow position: | chr7:67026403-67026092 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 423-718 |
| Cow position: | chr7:20433623-20433934 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 429-704 |
| Cow position: | chr7:33404082-33403785 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 431-718 |
| Cow position: | chr7:25441589-25441891 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 444-702 |
| Cow position: | chr7:30304661-30304936 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 54 |
| Conread position: | 453-717 |
| Cow position: | chr7:45930542-45930261 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 220 |
| Conread position: | 488-704 |
| Cow position: | chr7:3127204-3127439 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.