Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-602 |
| Cow position: | chr8:34349233-34349846 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 1-704 |
| Cow position: | chr8:22570742-22570017 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 256 |
| Conread position: | 1-704 |
| Cow position: | chr8:32630470-32629746 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 472 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 37, 143 |
| Conread position: | 1-704 |
| Cow position: | chr8:46218187-46217474 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 1-718 |
| Cow position: | chr8:3748638-3747906 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 1-718 |
| Cow position: | chr8:10749926-10750642 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 46 |
| Conread position: | 1-718 |
| Cow position: | chr8:30155676-30156400 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 472 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 1-718 |
| Cow position: | chr8:47674411-47675137 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 480 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 1-722 |
| Cow position: | chr8:47783252-47782540 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 471 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 43, 112 |
| Conread position: | 2-533 |
| Cow position: | chr8:11565324-11565846 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 348 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 2-704 |
| Cow position: | chr8:36634935-36634217 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 2-715 |
| Cow position: | chr8:50995349-50996083 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 208 |
| Conread position: | 3-718 |
| Cow position: | chr8:32317967-32317260 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 5-718 |
| Cow position: | chr8:35470879-35471602 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 11-544 |
| Cow position: | chr8:24914738-24914215 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 11-714 |
| Cow position: | chr8:14590306-14589581 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 198 |
| Conread position: | 11-715 |
| Cow position: | chr8:14927306-14926588 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 11-718 |
| Cow position: | chr8:25775085-25774347 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 222 |
| Conread position: | 11-718 |
| Cow position: | chr8:33589960-33590678 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 193 |
| Conread position: | 11-722 |
| Cow position: | chr8:18292396-18291694 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 455 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 13-240 |
| Cow position: | chr8:45691434-45691208 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 13-621 |
| Cow position: | chr8:41644108-41643486 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 417 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 14-722 |
| Cow position: | chr8:18483366-18484057 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 452 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 192, 22 |
| Conread position: | 15-718 |
| Cow position: | chr8:1347665-1346950 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 463 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 15-718 |
| Cow position: | chr8:8517011-8516294 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 468 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 98, 32 |
| Conread position: | 23-714 |
| Cow position: | chr8:23772241-23772928 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 23-718 |
| Cow position: | chr8:10742052-10741346 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 23-718 |
| Cow position: | chr8:12313811-12313101 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr8:38392223-38392924 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 23-718 |
| Cow position: | chr8:45794157-45793455 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr8:47660726-47660021 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr8:50929519-50928805 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 467 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 23-718 |
| Cow position: | chr8:59261344-59260650 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 24-718 |
| Cow position: | chr8:4687993-4688702 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 178 |
| Conread position: | 24-718 |
| Cow position: | chr8:12450635-12451342 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 24-718 |
| Cow position: | chr8:25523992-25524693 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 25-700 |
| Cow position: | chr8:34109475-34110161 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 172 |
| Conread position: | 25-715 |
| Cow position: | chr8:17312653-17313330 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 470 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 26-699 |
| Cow position: | chr8:33325649-33326333 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 26-718 |
| Cow position: | chr8:14256676-14257380 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr8:39820048-39820752 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 30-718 |
| Cow position: | chr8:32436482-32435776 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 35-718 |
| Cow position: | chr8:18054335-18055027 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 446 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 43-718 |
| Cow position: | chr8:8400501-8399804 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 119 |
| Conread position: | 44-718 |
| Cow position: | chr8:25412236-25412918 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 438 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 49-718 |
| Cow position: | chr8:19332192-19332871 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 446 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 51-704 |
| Cow position: | chr8:49218346-49219029 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 148 |
| Conread position: | 74-722 |
| Cow position: | chr8:47947735-47948384 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 82-700 |
| Cow position: | chr8:51068345-51067714 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 118 |
| Conread position: | 113-718 |
| Cow position: | chr8:47068128-47067520 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 409 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 90, 82 |
| Conread position: | 141-718 |
| Cow position: | chr8:60062126-60062709 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 54 |
| Conread position: | 142-684 |
| Cow position: | chr8:37093802-37093259 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 385 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 149, 17 |
| Conread position: | 151-720 |
| Cow position: | chr8:3227158-3226586 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 377 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 127, 12 |
| Conread position: | 256-701 |
| Cow position: | chr8:24190785-24191248 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 306 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 256-722 |
| Cow position: | chr8:44241872-44241388 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 324 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 258-718 |
| Cow position: | chr8:12804598-12805063 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 104 |
| Conread position: | 259-718 |
| Cow position: | chr8:9944098-9943626 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 265-696 |
| Cow position: | chr8:38194260-38194702 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 331-722 |
| Cow position: | chr8:14582136-14581746 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 133, 25 |
| Conread position: | 361-715 |
| Cow position: | chr8:24870559-24870189 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 361 |
| Conread position: | 372-701 |
| Cow position: | chr8:45158593-45158249 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 373-704 |
| Cow position: | chr8:29033040-29032695 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 92, 153 |
| Conread position: | 376-704 |
| Cow position: | chr8:21205476-21205825 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 379-711 |
| Cow position: | chr8:56589536-56589187 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 76 |
| Conread position: | 380-602 |
| Cow position: | chr8:60920745-60920979 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 380-720 |
| Cow position: | chr8:14879704-14879349 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 76 |
| Conread position: | 381-722 |
| Cow position: | chr8:12103842-12104195 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 400-718 |
| Cow position: | chr8:53836903-53837241 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 71, 92 |
| Conread position: | 401-718 |
| Cow position: | chr8:6464832-6465170 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 406-718 |
| Cow position: | chr8:29584191-29584524 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 58, 86 |
| Conread position: | 419-696 |
| Cow position: | chr8:4306166-4306465 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 428-718 |
| Cow position: | chr8:55272544-55272231 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 429-715 |
| Cow position: | chr8:7163359-7163643 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 89 |
| Conread position: | 432-715 |
| Cow position: | chr8:52642064-52641762 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 162 |
| Conread position: | 457-718 |
| Cow position: | chr8:46322367-46322085 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 269 |
| Conread position: | 470-722 |
| Cow position: | chr8:47360929-47360667 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 201 |
Show alignments to all cow chromosomes.