Cow genome map
| Conread name: | Ova1-OVRM10074B08 |
| Conread position: | 1-704 |
| Cow position: | chr9:9014302-9015009 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 1-704 |
| Cow position: | chr9:45874741-45875452 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 47 |
| Conread position: | 1-718 |
| Cow position: | chr9:3309831-3310566 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 206 |
| Conread position: | 1-718 |
| Cow position: | chr9:21410516-21411258 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 214 |
| Conread position: | 1-718 |
| Cow position: | chr9:28679190-28679908 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 1-718 |
| Cow position: | chr9:44384478-44385202 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 484 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 2-718 |
| Cow position: | chr9:44819375-44820081 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 18 |
| Conread position: | 11-714 |
| Cow position: | chr9:31808810-31809526 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 117 |
| Conread position: | 11-718 |
| Cow position: | chr9:37969983-37969273 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 480 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 27, 197 |
| Conread position: | 12-722 |
| Cow position: | chr9:4717404-4718117 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 486 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 15-718 |
| Cow position: | chr9:2871567-2872283 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 16-602 |
| Cow position: | chr9:9707368-9707946 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 388 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 23-602 |
| Cow position: | chr9:19158293-19157718 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 183 |
| Conread position: | 23-696 |
| Cow position: | chr9:42310927-42311623 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 23-718 |
| Cow position: | chr9:51180931-51180227 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 24-718 |
| Cow position: | chr9:18508579-18507880 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 24-718 |
| Cow position: | chr9:27783435-27784136 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 24-718 |
| Cow position: | chr9:59537342-59538052 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 25-702 |
| Cow position: | chr9:10547905-10548574 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 44 |
| Conread position: | 25-718 |
| Cow position: | chr9:46042003-46041308 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 26-702 |
| Cow position: | chr9:1250748-1250060 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 26-718 |
| Cow position: | chr9:30827990-30828692 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr9:50791962-50792668 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-718 |
| Cow position: | chr9:64015421-64014720 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 26-720 |
| Cow position: | chr9:31065969-31066671 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 29-718 |
| Cow position: | chr9:7003982-7004685 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 452 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 56, 221 |
| Conread position: | 30-718 |
| Cow position: | chr9:4942556-4941850 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 30-718 |
| Cow position: | chr9:47043213-47043915 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 32-718 |
| Cow position: | chr9:38677402-38678093 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 38-670 |
| Cow position: | chr9:27036161-27036806 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 428 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 10, 160 |
| Conread position: | 43-701 |
| Cow position: | chr9:1074911-1074237 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 158 |
| Conread position: | 43-721 |
| Cow position: | chr9:35594815-35594135 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 444 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 109-712 |
| Cow position: | chr9:779481-778877 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 405 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 183, 25 |
| Conread position: | 137-602 |
| Cow position: | chr9:129825-129368 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 322 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 163-698 |
| Cow position: | chr9:2845953-2846491 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 358 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 255-602 |
| Cow position: | chr9:43665138-43665481 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 256-715 |
| Cow position: | chr9:29026451-29025981 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 256-718 |
| Cow position: | chr9:6709430-6709909 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 322 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 256-718 |
| Cow position: | chr9:56302980-56302495 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 116 |
| Conread position: | 260-673 |
| Cow position: | chr9:8781452-8781019 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 32, 112 |
| Conread position: | 261-722 |
| Cow position: | chr9:7090979-7090525 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 288-704 |
| Cow position: | chr9:37066360-37066798 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 341-718 |
| Cow position: | chr9:2200100-2200501 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 166 |
| Conread position: | 361-718 |
| Cow position: | chr9:29626851-29626476 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 126, 27 |
| Conread position: | 361-718 |
| Cow position: | chr9:32970640-32971011 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 116, 80 |
| Conread position: | 365-704 |
| Cow position: | chr9:31090757-31091118 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 375-718 |
| Cow position: | chr9:16177176-16177540 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 96, 352 |
| Conread position: | 376-715 |
| Cow position: | chr9:1982415-1982766 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 88, 145 |
| Conread position: | 379-718 |
| Cow position: | chr9:33951597-33951251 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 85, 124 |
| Conread position: | 380-718 |
| Cow position: | chr9:203700-203341 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 380-718 |
| Cow position: | chr9:14001649-14002008 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 380-718 |
| Cow position: | chr9:59481246-59480890 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 155, 95 |
| Conread position: | 395-706 |
| Cow position: | chr9:8167583-8167264 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 5 |
| Conread position: | 415-695 |
| Cow position: | chr9:47515966-47516265 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 5 |
| Conread position: | 459-718 |
| Cow position: | chr9:64013563-64013285 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 469-702 |
| Cow position: | chr9:49116435-49116676 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 14 |
Show alignments to all cow chromosomes.