Cow genome map

Conread name: Ova1-OVRM10075A05

Conread position: 21-286
Cow position: chr10:50042875-50042615 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 16, 97

Conread position: 28-271
Cow position: chr10:57582717-57582469 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 16

Conread position: 52-276
Cow position: chr10:52113426-52113651 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 155, 13

Conread position: 54-286
Cow position: chr10:15319120-15318897 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 15

Conread position: 60-286
Cow position: chr10:30746886-30746685 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 60-287
Cow position: chr10:22139544-22139767 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 40

Conread position: 68-193
Cow position: chr10:40999061-40998939 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 68-286
Cow position: chr10:39228365-39228160 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 26

Conread position: 70-286
Cow position: chr10:1032962-1033178 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 114, 41

Conread position: 70-286
Cow position: chr10:22810834-22811045 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 72-274
Cow position: chr10:6530419-6530210 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 45

Conread position: 72-285
Cow position: chr10:29816975-29816777 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 142, 19

Conread position: 73-285
Cow position: chr10:29252385-29252178 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 115, 13

Conread position: 74-275
Cow position: chr10:59874497-59874687 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 74-286
Cow position: chr10:26209033-26209235 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 74-286
Cow position: chr10:56387611-56387832 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 42

Conread position: 76-287
Cow position: chr10:34174753-34174966 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 97, 31

Conread position: 78-286
Cow position: chr10:25699860-25699662 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 102

Conread position: 78-286
Cow position: chr10:41596583-41596377 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 10, 28

Conread position: 78-302
Cow position: chr10:37822402-37822612 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 25

Conread position: 79-259
Cow position: chr10:17701148-17701322 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 14

Conread position: 79-287
Cow position: chr10:31265820-31266043 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 98, 16

Conread position: 80-193
Cow position: chr10:29090355-29090470 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 80-247
Cow position: chr10:4198199-4198036 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 80-273
Cow position: chr10:50609760-50609572 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 146, 21

Conread position: 80-275
Cow position: chr10:25580076-25580267 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 159
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 21

Conread position: 80-285
Cow position: chr10:2260355-2260157 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 78

Conread position: 80-286
Cow position: chr10:15115832-15115626 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 15

Conread position: 80-286
Cow position: chr10:17176242-17176044 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 153, 32

Conread position: 80-286
Cow position: chr10:36045210-36045011 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 146, 32

Conread position: 80-286
Cow position: chr10:49947661-49947868 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 80-286
Cow position: chr10:53076319-53076126 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 80-288
Cow position: chr10:40563602-40563393 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 34

Conread position: 80-333
Cow position: chr10:63932258-63932503 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 146, 13

Conread position: 83-320
Cow position: chr10:42230992-42230776 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 84-286
Cow position: chr10:46941267-46941466 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 81, 16

Conread position: 86-286
Cow position: chr10:51696962-51696753 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 88-286
Cow position: chr10:38386044-38386229 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 88-286
Cow position: chr10:53405687-53405485 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 7

Conread position: 88-287
Cow position: chr10:3362834-3362638 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 29, 0

Conread position: 88-288
Cow position: chr10:52168930-52169117 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 19

Conread position: 89-266
Cow position: chr10:51155238-51155063 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 11

Conread position: 89-305
Cow position: chr10:2695170-2694956 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 82, 24

Conread position: 90-274
Cow position: chr10:68009810-68009987 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 90-286
Cow position: chr10:28776578-28776363 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 18

Conread position: 93-286
Cow position: chr10:50015797-50015985 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 95-259
Cow position: chr10:52483305-52483468 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 33

Conread position: 95-284
Cow position: chr10:69997595-69997786 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 17

Conread position: 95-286
Cow position: chr10:32973014-32973193 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 95-286
Cow position: chr10:50201197-50201015 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 150, 17

Conread position: 95-286
Cow position: chr10:56180761-56180576 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 95-321
Cow position: chr10:47690574-47690366 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 138, 13

Conread position: 98-286
Cow position: chr10:37785181-37785353 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 102-282
Cow position: chr10:669056-668881 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 153, 92

Conread position: 103-288
Cow position: chr10:27749861-27749683 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 108-284
Cow position: chr10:13316126-13315953 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 109-286
Cow position: chr10:628188-627997 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 109-286
Cow position: chr10:24763663-24763496 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 110-265
Cow position: chr10:22567262-22567417 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 24

Conread position: 111-205
Cow position: chr10:45770500-45770406 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-206
Cow position: chr10:57457836-57457741 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 111-260
Cow position: chr10:1468066-1467926 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 111-275
Cow position: chr10:27583942-27583780 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 26, 99

Conread position: 111-276
Cow position: chr10:9083497-9083324 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 129

Conread position: 111-284
Cow position: chr10:22396436-22396267 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 111-284
Cow position: chr10:32646144-32645962 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 111-286
Cow position: chr10:4151718-4151551 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 78, 0

Conread position: 111-286
Cow position: chr10:17389019-17388852 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 111-286
Cow position: chr10:49253550-49253375 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 70, 100

Conread position: 111-288
Cow position: chr10:32573917-32573741 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 111-309
Cow position: chr10:48742345-48742537 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 111-317
Cow position: chr10:37442727-37442521 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 179, 94

Conread position: 111-320
Cow position: chr10:56683021-56683221 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 64, 96

Conread position: 111-320
Cow position: chr10:59663773-59663989 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 177

Conread position: 111-321
Cow position: chr10:60961110-60960913 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 111-324
Cow position: chr10:25529005-25529212 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 20

Conread position: 111-324
Cow position: chr10:43509183-43508970 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 177, 56

Conread position: 112-284
Cow position: chr10:2185520-2185363 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 112-286
Cow position: chr10:17798410-17798240 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 26, 96

Conread position: 112-320
Cow position: chr10:22472514-22472308 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 168

Conread position: 113-286
Cow position: chr10:14538245-14538411 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 120, 54

Conread position: 119-287
Cow position: chr10:47651472-47651310 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 126-320
Cow position: chr10:24902812-24903001 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 162, 0

Conread position: 135-283
Cow position: chr10:49455929-49456077 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 5, 46

Conread position: 166-286
Cow position: chr10:77502-77385 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 167-287
Cow position: chr10:55119751-55119874 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 177-286
Cow position: chr10:11213234-11213124 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 203-286
Cow position: chr10:53674921-53674838 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.