Cow genome map

Conread name: Ova1-OVRM10075A05

Conread position: 57-288
Cow position: chr13:11532401-11532639 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 182

Conread position: 68-284
Cow position: chr13:26422792-26422998 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 47

Conread position: 69-205
Cow position: chr13:20175278-20175411 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 72-286
Cow position: chr13:37381538-37381750 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 28

Conread position: 73-286
Cow position: chr13:49255498-49255291 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 75-286
Cow position: chr13:29908212-29908005 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 95, 18

Conread position: 75-286
Cow position: chr13:37621610-37621408 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 77-286
Cow position: chr13:11103439-11103250 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 195, 11

Conread position: 78-286
Cow position: chr13:2136851-2137058 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 132

Conread position: 78-286
Cow position: chr13:19467597-19467389 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 105

Conread position: 79-193
Cow position: chr13:12302621-12302505 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 79-286
Cow position: chr13:8478152-8478353 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 134, 16

Conread position: 79-286
Cow position: chr13:45023458-45023260 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 34, 116

Conread position: 80-206
Cow position: chr13:27174074-27173952 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 80-229
Cow position: chr13:5082372-5082525 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 80-271
Cow position: chr13:50768159-50768354 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 80-273
Cow position: chr13:4420070-4420267 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 80-276
Cow position: chr13:20706455-20706266 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 104, 35

Conread position: 80-285
Cow position: chr13:42018071-42017860 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 33

Conread position: 80-286
Cow position: chr13:32186032-32186229 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 98

Conread position: 80-286
Cow position: chr13:39398401-39398600 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 80-310
Cow position: chr13:32387270-32387033 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 88, 13

Conread position: 81-211
Cow position: chr13:41616633-41616505 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 81-302
Cow position: chr13:37517416-37517213 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 81-346
Cow position: chr13:47643821-47644069 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 177, 14

Conread position: 82-285
Cow position: chr13:20679084-20679287 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 14, 32

Conread position: 83-286
Cow position: chr13:56155398-56155202 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 83-292
Cow position: chr13:26365642-26365859 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 83, 17

Conread position: 86-285
Cow position: chr13:6087138-6086945 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 26, 0

Conread position: 86-286
Cow position: chr13:23961031-23960853 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 87-267
Cow position: chr13:20684374-20684198 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 152
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 123, 31

Conread position: 87-284
Cow position: chr13:9266076-9265880 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 114

Conread position: 87-288
Cow position: chr13:11538578-11538783 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 149

Conread position: 87-314
Cow position: chr13:5992618-5992834 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 51

Conread position: 88-301
Cow position: chr13:13181943-13182160 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 46

Conread position: 93-206
Cow position: chr13:50712840-50712952 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 93-286
Cow position: chr13:17229483-17229666 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 93-286
Cow position: chr13:17619661-17619841 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 93-286
Cow position: chr13:51227985-51227791 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 19

Conread position: 94-295
Cow position: chr13:372631-372442 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 95-270
Cow position: chr13:26742910-26743080 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 95-273
Cow position: chr13:11071443-11071264 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 113, 12

Conread position: 95-286
Cow position: chr13:18215143-18215315 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 95-286
Cow position: chr13:52881099-52880916 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 155
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 11, 0

Conread position: 98-286
Cow position: chr13:40943004-40943192 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 35

Conread position: 102-319
Cow position: chr13:54681882-54682082 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 107-286
Cow position: chr13:37984357-37984180 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 108-311
Cow position: chr13:18701147-18701346 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 194, 83

Conread position: 109-286
Cow position: chr13:5005778-5005949 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 23

Conread position: 111-265
Cow position: chr13:54689321-54689471 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 50

Conread position: 111-270
Cow position: chr13:52198903-52199060 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 99, 20

Conread position: 111-276
Cow position: chr13:37803677-37803830 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 111-283
Cow position: chr13:53309356-53309180 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 111-286
Cow position: chr13:185303-185479 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 97, 64

Conread position: 111-286
Cow position: chr13:8350100-8350272 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 111-286
Cow position: chr13:19750495-19750664 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 111-286
Cow position: chr13:20531698-20531525 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 96, 0

Conread position: 111-286
Cow position: chr13:27419292-27419127 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 111-286
Cow position: chr13:55316425-55316242 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 111-287
Cow position: chr13:22761807-22761633 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 88

Conread position: 111-287
Cow position: chr13:29957806-29957975 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 57

Conread position: 111-287
Cow position: chr13:52586264-52586087 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 97, 0

Conread position: 111-288
Cow position: chr13:18049454-18049272 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 126

Conread position: 111-288
Cow position: chr13:25450717-25450535 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 124

Conread position: 111-320
Cow position: chr13:17619391-17619592 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 111-321
Cow position: chr13:51116258-51116041 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 185

Conread position: 112-265
Cow position: chr13:3948273-3948431 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 134

Conread position: 112-286
Cow position: chr13:18696622-18696789 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 113-267
Cow position: chr13:17799854-17800010 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 102, 55

Conread position: 113-286
Cow position: chr13:8354978-8355153 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 78, 165

Conread position: 113-287
Cow position: chr13:23525883-23526064 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 54, 18

Conread position: 114-271
Cow position: chr13:8609769-8609613 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 25

Conread position: 114-276
Cow position: chr13:4980815-4980986 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 114-286
Cow position: chr13:43525449-43525286 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 114-289
Cow position: chr13:5857758-5857591 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 119-286
Cow position: chr13:1043189-1043020 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 76

Conread position: 121-316
Cow position: chr13:17971235-17971057 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 125-286
Cow position: chr13:23167309-23167152 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 55

Conread position: 127-249
Cow position: chr13:29888990-29888867 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 132-286
Cow position: chr13:18172131-18172285 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 142-286
Cow position: chr13:3209509-3209371 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 39

Conread position: 156-286
Cow position: chr13:17439951-17439819 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 163-286
Cow position: chr13:37640418-37640538 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 165-287
Cow position: chr13:32363352-32363230 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 166-286
Cow position: chr13:10929160-10929039 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 181-286
Cow position: chr13:23856055-23856160 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 185-286
Cow position: chr13:9981991-9981891 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 186-286
Cow position: chr13:20826875-20826774 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 186-286
Cow position: chr13:21171723-21171623 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 190-286
Cow position: chr13:20666533-20666437 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 190-286
Cow position: chr13:41806625-41806721 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 193-286
Cow position: chr13:21188224-21188317 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.